RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 WFIKKN2Q8TEU8 576 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 KCTD13Q8WZ19 329 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 NDRG1Q92597 394 aaKnown RBP14.85□□□□□ -0.03
RPP40-201ENST00000319533 PHF12Q96QT6 1004 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 IRX2Q9BZI1 471 aaPredicted RBP14.85□□□□□ -0.03
RPP40-201ENST00000319533 MIR1-1HGQ9H1L0 117 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 GAREM1Q9H706 876 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 FBRSQ9HAH7 460 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 EIF2B4Q9UI10 523 aaKnown RBP14.85□□□□□ -0.03
RPP40-201ENST00000319533 LHX6Q9UPM6 363 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 PLXNB3Q9ULL4 1909 aa14.85□□□□□ -0.03
RPP40-201ENST00000319533 CETN3O15182 167 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 ZBTB16Q05516 673 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 BST2Q10589 180 aaKnown RBP14.84□□□□□ -0.03
RPP40-201ENST00000319533 PTPRNQ16849 979 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 GOLGA7BQ2TAP0 167 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 HLA-BQ31612 363 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 PKDCCQ504Y2 493 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 ADGRF1Q5T601 910 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 BSPRYQ5W0U4 402 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 ADIPOR2Q86V24 386 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 ZC3H3Q8IXZ2 948 aaKnown RBP14.84□□□□□ -0.03
RPP40-201ENST00000319533 UBR7Q8N806 425 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 LHX5Q9H2C1 402 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 TM7SF3Q9NS93 570 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 RMND1Q9NWS8 449 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 TOR4AQ9NXH8 423 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 TSPAN16Q9UKR8 245 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 FNDC3AQ9Y2H6 1198 aaKnown RBP14.84□□□□□ -0.03
RPP40-201ENST00000319533 KNL1Q8NG31 2342 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 NBEAQ8NFP9 2946 aa14.84□□□□□ -0.03
RPP40-201ENST00000319533 CABIN1Q9Y6J0 2220 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 YJEFN3A6XGL0 299 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 E7ENQ6 273 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 SMC2O95347 1197 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 EPB41P11171 864 aaKnown RBP14.83□□□□□ -0.04
RPP40-201ENST00000319533 HLA-EP13747 358 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 AFF3P51826 1226 aaKnown RBP14.83□□□□□ -0.04
RPP40-201ENST00000319533 CUL2Q13617 745 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 CBWD6Q4V339 395 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 COBLL1Q53SF7 1204 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 SGO2Q562F6 1265 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 CBWD3Q5JTY5 395 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 CBWD5Q5RIA9 395 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 MPP7Q5T2T1 576 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 MSANTD2Q6P1R3 559 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 RNF139Q8WU17 664 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 TMA16Q96EY4 203 aaKnown RBP14.83□□□□□ -0.04
RPP40-201ENST00000319533 EEF2KMTQ96G04 330 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 CDC6Q99741 560 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 LRRC4Q9HBW1 653 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 CNGB3Q9NQW8 809 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 ABCC13Q9NSE7 274 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 KIAA1257Q9ULG3 409 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 PLA2G4CQ9UP65 541 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.83□□□□□ -0.04
RPP40-201ENST00000319533 GPSM3Q9Y4H4 160 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 SLCO1B1Q9Y6L6 691 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 NUMA1Q14980 2115 aa14.83□□□□□ -0.04
RPP40-201ENST00000319533 FASNP49327 2511 aaKnown RBP14.83□□□□□ -0.04
RPP40-201ENST00000319533 A0A1B0GVT2 93 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 O00370 1275 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 SLC16A3O15427 465 aaKnown RBP14.82□□□□□ -0.04
RPP40-201ENST00000319533 FLRT2O43155 660 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 TSPAN3O60637 253 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 IGLV3-27P01718 113 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 VDRP11473 427 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 ACSL1P33121 698 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 RPS14P62263 151 aaKnown RBP14.82□□□□□ -0.04
RPP40-201ENST00000319533 ARID5AQ03989 594 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 ADIGQ0VDE8 80 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 PNOCQ13519 176 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 COL9A2Q14055 689 aaPredicted RBP14.82□□□□□ -0.04
RPP40-201ENST00000319533 GSE1Q14687 1217 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 CHST9Q7L1S5 443 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 TMPRSS7Q7RTY8 843 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 AHI1Q8N157 1196 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 SETD7Q8WTS6 366 aaKnown RBP14.82□□□□□ -0.04
RPP40-201ENST00000319533 CYB5D2Q8WUJ1 264 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 AZIN2Q96A70 460 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 LMLNQ96KR4 655 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 TIGD1Q96MW7 591 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 C6orf106Q9H6K1 298 aaPredicted RBP14.82□□□□□ -0.04
RPP40-201ENST00000319533 PRSS16Q9NQE7 514 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 ABCB8Q9NUT2 735 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 CHMP5Q9NZZ3 219 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 DKK4Q9UBT3 224 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 HESX1Q9UBX0 185 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 SFMBT1Q9UHJ3 866 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 GGA2Q9UJY4 613 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 PTPRBP23467 1997 aa14.82□□□□□ -0.04
RPP40-201ENST00000319533 APC2O95996 2303 aa14.81□□□□□ -0.04
RPP40-201ENST00000319533 ACACAQ13085 2346 aa14.81□□□□□ -0.04
RPP40-201ENST00000319533 GABBR2O75899 941 aa14.81□□□□□ -0.04
RPP40-201ENST00000319533 DLDP09622 509 aaKnown RBP14.81□□□□□ -0.04
RPP40-201ENST00000319533 SETSIPP0DME0 302 aa14.81□□□□□ -0.04
RPP40-201ENST00000319533 PABPC1P11940 636 aaKnown RBP14.81□□□□□ -0.04
RPP40-201ENST00000319533 GRIA4P48058 902 aa14.81□□□□□ -0.04
RPP40-201ENST00000319533 CSNK1EP49674 416 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms