RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
SYCN-201ENST00000318438 SLC6A18Q96N87 628 aa13.87□□□□□ -0.19
SYCN-201ENST00000318438 CGRRF1Q99675 332 aa13.87□□□□□ -0.19
SYCN-201ENST00000318438 LHX5Q9H2C1 402 aa13.87□□□□□ -0.19
SYCN-201ENST00000318438 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
SYCN-201ENST00000318438 R3HCC1Q9Y3T6 440 aaKnown RBP13.87□□□□□ -0.19
SYCN-201ENST00000318438 NME7Q9Y5B8 376 aa13.87□□□□□ -0.19
SYCN-201ENST00000318438 PDXKO00764 312 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 VILLO15195 856 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 EXOC3O60645 756 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 TBX18O95935 607 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 MYF5P13349 255 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 BCAT1P54687 386 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 GABREP78334 506 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 ILKQ13418 452 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 RDH13Q8NBN7 331 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 OR5B17Q8NGF7 314 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 SORCS1Q8WY21 1168 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 FBXO10Q9UK96 956 aa13.86□□□□□ -0.19
SYCN-201ENST00000318438 K7ENP7 123 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 NPC1O15118 1278 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 RTN3O95197 1032 aaPredicted RBP13.85□□□□□ -0.19
SYCN-201ENST00000318438 MT-CO3P00414 261 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 WNT1P04628 370 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 DLATP10515 647 aaKnown RBP13.85□□□□□ -0.19
SYCN-201ENST00000318438 CKMT2P17540 419 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 TNNI1P19237 187 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 WARSP23381 471 aaKnown RBP13.85□□□□□ -0.19
SYCN-201ENST00000318438 EPHA8P29322 1005 aaPredicted RBP13.85□□□□□ -0.19
SYCN-201ENST00000318438 TUBP50607 506 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 MFAP3P55082 362 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 RACK1P63244 317 aaKnown RBP13.85□□□□□ -0.19
SYCN-201ENST00000318438 BNIP3Q12983 259 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 SNX30Q5VWJ9 437 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 INO80CQ6PI98 192 aaPredicted RBP13.85□□□□□ -0.19
SYCN-201ENST00000318438 ATG14Q6ZNE5 492 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 OR2T3Q8NH03 318 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 KCNK16Q96T55 309 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 KLF16Q9BXK1 252 aaPredicted RBP13.85□□□□□ -0.19
SYCN-201ENST00000318438 DPH1Q9BZG8 443 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 ELOVL4Q9GZR5 314 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 BTBD1Q9H0C5 482 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 DPEP3Q9H4B8 488 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.85□□□□□ -0.19
SYCN-201ENST00000318438 DMAC2Q9NW81 257 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 ADAMTS1Q9UHI8 967 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 SLC27A6Q9Y2P4 619 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 AHCTF1Q8WYP5 2266 aa13.85□□□□□ -0.19
SYCN-201ENST00000318438 TLR5O60602 858 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 NR3C1P04150 777 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 IGHV4-34P06331 123 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 SLC5A3P53794 718 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 SERPINA13PQ6UXR4 307 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 TRAPPC11Q7Z392 1133 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 GUF1Q8N442 669 aaKnown RBP13.84□□□□□ -0.19
SYCN-201ENST00000318438 UCMAQ8WVF2 138 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 CCDC127Q96BQ5 260 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 VCPIP1Q96JH7 1222 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 MMS19Q96T76 1030 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 MRPL45Q9BRJ2 306 aaKnown RBP13.84□□□□□ -0.19
SYCN-201ENST00000318438 B3GNT5Q9BYG0 378 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 CIPCQ9C0C6 399 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 LSM7Q9UK45 103 aaKnown RBP13.84□□□□□ -0.19
SYCN-201ENST00000318438 TRAF3IP3Q9Y228 551 aa13.84□□□□□ -0.19
SYCN-201ENST00000318438 USP9YO00507 2555 aaPredicted RBP13.83□□□□□ -0.19
SYCN-201ENST00000318438 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
SYCN-201ENST00000318438 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
SYCN-201ENST00000318438 ZDHHC11BP0C7U3 371 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 PTPN1P18031 435 aaKnown RBP13.83□□□□□ -0.2
SYCN-201ENST00000318438 GNL1P36915 607 aaPredicted RBP13.83□□□□□ -0.2
SYCN-201ENST00000318438 ERVPABLB-1P60509 514 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 CLDN10P78369 228 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 PNOCQ13519 176 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 UBAP2LQ14157 1087 aaKnown RBP13.83□□□□□ -0.2
SYCN-201ENST00000318438 NFIL3Q16649 462 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 ZNF366Q8N895 744 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 PARD3BQ8TEW8 1205 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 TIGD1Q96MW7 591 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 SNX25Q9H3E2 840 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 ASCL3Q9NQ33 180 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 ELOVL2Q9NXB9 296 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
SYCN-201ENST00000318438 TLN1Q9Y490 2541 aaKnown RBP13.83□□□□□ -0.2
SYCN-201ENST00000318438 CKAP5Q14008 2032 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 FAM47DPA6NHR8 397 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 WNT9AO14904 365 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 MAPK13O15264 365 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 SUV39H1O43463 412 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 USP12O75317 370 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 TACC1O75410 805 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 CST3P01034 146 aaPredicted RBP13.82□□□□□ -0.2
SYCN-201ENST00000318438 PENKP01210 267 aaPredicted RBP13.82□□□□□ -0.2
SYCN-201ENST00000318438 FAM163BP0C2L3 166 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 AP3M2P53677 418 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 CAMK2GQ13555 558 aaPredicted RBP13.82□□□□□ -0.2
SYCN-201ENST00000318438 C4orf17Q53FE4 359 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 SFMBT2Q5VUG0 894 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 TMEM215Q68D42 235 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 KIAA0895LQ68EN5 471 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms