RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 OTUD4Q01804 1114 aaKnown RBP13.49□□□□□ -0.25
CPNE1-201ENST00000317677 DPYSL3Q14195 570 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 MUM1Q2TAK8 710 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 MFSD5Q6N075 450 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 ZNF365Q70YC5 407 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 FAM35AQ86V20 835 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 ZNF280BQ86YH2 543 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 FAM126BQ8IXS8 530 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 FAM13CQ8NE31 585 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 ACTL9Q8TC94 416 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 GRK7Q8WTQ7 553 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 NKD2Q969F2 451 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-201ENST00000317677 PWWP2AQ96N64 755 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 TMEM209Q96SK2 561 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 PKMYT1Q99640 499 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 SNRNP25Q9BV90 132 aaKnown RBP13.49□□□□□ -0.25
CPNE1-201ENST00000317677 KRT82Q9NSB4 513 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 ASIC3Q9UHC3 531 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 PATJQ8NI35 1801 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 HHLA1C9JL84 531 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 M0QZQ0 153 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 NBNO60934 754 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 B3GAT3O94766 335 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 CYP11A1P05108 521 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 GM2AP17900 193 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 ACADSBP45954 432 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 ITGA8P53708 1063 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 ARCQ7LC44 396 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 ALLCQ8N6M5 410 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 KCTD6Q8NC69 237 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 OR10T2Q8NGX3 314 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 UCMAQ8WVF2 138 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 KCTD13Q8WZ19 329 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 KCNK16Q96T55 309 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 DDX23Q9BUQ8 820 aaKnown RBP13.49□□□□□ -0.25
CPNE1-201ENST00000317677 TLE6Q9H808 572 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 TMLHEQ9NVH6 421 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 KLHL14Q9P2G3 628 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 TRIM33Q9UPN9 1127 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 TBC1D30Q9Y2I9 924 aa13.49□□□□□ -0.25
CPNE1-201ENST00000317677 NRP1O14786 923 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 PRPSAP2O60256 369 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 GAS8O95995 478 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 MAGEA10P43363 369 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-201ENST00000317677 MNX1P50219 401 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-201ENST00000317677 PMS2P54278 862 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 GDF10P55107 478 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 CDH6P55285 790 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 DSC1Q08554 894 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 DENND2CQ68D51 928 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 SCYL2Q6P3W7 929 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 NPNTQ6UXI9 565 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 LRRC8DQ7L1W4 858 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 DEFB106AQ8N104 65 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 LRRC43Q8N309 656 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 SMYD1Q8NB12 490 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 RSPH1Q8WYR4 309 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 SNF8Q96H20 258 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 TBCBQ99426 244 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 MED10Q9BTT4 135 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 CALN1Q9BXU9 219 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 SEMA4AQ9H3S1 761 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 PCDH18Q9HCL0 1135 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 UBN1Q9NPG3 1134 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 NMRK1Q9NWW6 199 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 IL1RAPL1Q9NZN1 696 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 CDH9Q9ULB4 789 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 DRG1Q9Y295 367 aaKnown RBP13.48□□□□□ -0.25
CPNE1-201ENST00000317677 VWA8A3KMH1 1905 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 TANC1Q9C0D5 1861 aa13.48□□□□□ -0.25
CPNE1-201ENST00000317677 FYNP06241 537 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 RASSF2P50749 326 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 IFI35P80217 286 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-201ENST00000317677 MRPS5P82675 430 aaKnown RBP13.47□□□□□ -0.25
CPNE1-201ENST00000317677 FAM182AQ5T1J6 154 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 FAM171BQ6P995 826 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 SLC24A5Q71RS6 500 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 BHLHA9Q7RTU4 235 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 BNIPLQ7Z465 357 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 LRRTM3Q86VH5 581 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 RFX6Q8HWS3 928 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 PQLC3Q8N755 202 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 CKAP2Q8WWK9 683 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 MYLPFQ96A32 169 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 TMEM121Q9BTD3 319 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 ROPN1BQ9BZX4 212 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-201ENST00000317677 ROPN1Q9HAT0 212 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-201ENST00000317677 FGFR1OP2Q9NVK5 253 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 TCP11X1B4DZS4 312 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 KBTBD13C9JR72 458 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 DAB1O75553 588 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 ITGAVP06756 1048 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 ODC1P11926 461 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 COL6A1P12109 1028 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 IDO1P14902 403 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 ATF2P15336 505 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 SELPP16109 830 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 ITIH2P19823 946 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms