RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 VWA3AA6NCI4 1184 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 RNASET2O00584 256 aaKnown RBP4.5□□□□□ -1.69
SMCO3-201ENST00000316048 MUSKO15146 869 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 SPRY2O43597 315 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 CNPP09543 421 aaKnown RBP4.5□□□□□ -1.69
SMCO3-201ENST00000316048 TMEM225BP0DP42 221 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 ITPKBP27987 946 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 CASP2P42575 452 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 GSTM5P46439 218 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 EIF4A1P60842 406 aaKnown RBP4.5□□□□□ -1.69
SMCO3-201ENST00000316048 SLC25A3Q00325 362 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 GALNT2Q10471 571 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 CYP1B1Q16678 543 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 TREML2Q5T2D2 321 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 CCDC144NLQ6NUI1 221 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 KRT27Q7Z3Y8 459 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 TTC30AQ86WT1 665 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 GALNT4Q8N4A0 578 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 XAGE5Q8WWM1 108 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 SOCS4Q8WXH5 440 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 HDAC2Q92769 488 aaKnown RBP4.5□□□□□ -1.69
SMCO3-201ENST00000316048 SDCCAG3Q96C92 435 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 BOD1Q96IK1 185 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 CENPOQ9BU64 300 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 KLC2Q9H0B6 622 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 IL21RQ9HBE5 538 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 TLR8Q9NR97 1041 aaKnown RBP4.5□□□□□ -1.69
SMCO3-201ENST00000316048 RASSF1Q9NS23 344 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 AASSQ9UDR5 926 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 STEAP1Q9UHE8 339 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 ZBTB1Q9Y2K1 713 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 RPS6KL1Q9Y6S9 549 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 PTPRMP28827 1452 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 DLC1Q96QB1 1528 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 GXYLT2A0PJZ3 443 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 A6NCN8 305 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 KLK10O43240 276 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 BAIAP3O94812 1187 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 IL6RP08887 468 aaPredicted RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 DDX6P26196 483 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 CLCA4Q14CN2 919 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 GPR149Q86SP6 731 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 SIAH1Q8IUQ4 282 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 LRRC71Q8N4P6 559 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 TOR1AIP2Q8NFQ8 470 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 KTI12Q96EK9 354 aaPredicted RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 RBM17Q96I25 401 aaKnown RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 PRR25Q96S07 402 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 ZCCHC4Q9H5U6 513 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 ACAD9Q9H845 621 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 SAP30LQ9HAJ7 183 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 LIN7CQ9NUP9 197 aaKnown RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 TMEM74BQ9NUR3 256 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 PCDHA10Q9Y5I2 948 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 BLMP54132 1417 aaPredicted RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 POLR3AO14802 1390 aaPredicted RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 TULP4Q9NRJ4 1543 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 GGT5P36269 586 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 CCT4P50991 539 aaKnown RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 TBCCQ15814 346 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 AAK1Q2M2I8 961 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 SPDYE7PQ495Y7 208 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 SLC45A4Q5BKX6 768 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 XP32Q5T750 250 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 P3H2Q8IVL5 708 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 FAM71DQ8N9W8 422 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 CLEC4CQ8WTT0 213 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 EDAQ92838 391 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 CTHRC1Q96CG8 243 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 ZBTB10Q96DT7 871 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 PTCD3Q96EY7 689 aaKnown RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 REXO5Q96IC2 774 aaKnown RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 EIF3CQ99613 913 aaKnown RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 PAAF1Q9BRP4 392 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 CHCHD6Q9BRQ6 235 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 TTYH1Q9H313 450 aaPredicted RBP4.49□□□□□ -1.69
SMCO3-201ENST00000316048 ADGRA2Q96PE1 1338 aa4.49□□□□□ -1.69
SMCO3-201ENST00000316048 FAM135BQ49AJ0 1406 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 CCDC187A0A096LP49 1063 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 A0A1W2PPH5 198 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 EFCAB8A8MWE9 144 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 AP4M1O00189 453 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 PAX4O43316 350 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 TFRCP02786 760 aaKnown RBP4.48□□□□□ -1.69
SMCO3-201ENST00000316048 CHRM2P08172 466 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 ACRV1P26436 265 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 ABCD3P28288 659 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 TNNT2P45379 298 aaPredicted RBP4.48□□□□□ -1.69
SMCO3-201ENST00000316048 EIF5P55010 431 aaKnown RBP4.48□□□□□ -1.69
SMCO3-201ENST00000316048 CASP6P55212 293 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 SEMA3BQ13214 749 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 CFAP161Q6P656 301 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 DTX2Q86UW9 622 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 CHD1LQ86WJ1 897 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 TMPRSS6Q8IU80 811 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 PALM2Q8IXS6 379 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 ANKRD52Q8NB46 1076 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 IL17DQ8TAD2 202 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 TBC1D22AQ8WUA7 517 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms