RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 TPST1O60507 370 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 KRT8P05787 483 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 ATP5BP06576 529 aaKnown RBP12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 TFE3P19532 575 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 PSMA3P25788 255 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 CRABP2P29373 138 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 S100A5P33763 92 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 ATP5C1P36542 298 aaKnown RBP12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 BCL2L1Q07817 233 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 BMPR2Q13873 1038 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 MEA1Q16626 185 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 KCNMB4Q86W47 210 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 SLC9A9Q8IVB4 645 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 ADAM32Q8TC27 787 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 COPS5Q92905 334 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 GFM2Q969S9 779 aaKnown RBP12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 LRRC39Q96DD0 335 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 ZNF558Q96NG5 402 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 TKTL2Q9H0I9 626 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 VPS51Q9UID3 782 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 DISP2A7MBM2 1401 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 SLC9A3R1O14745 358 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 RAD51BO15315 384 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 GSNP06396 782 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 RARAP10276 462 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 NUMBP49757 651 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 MRPS6P82932 125 aaKnown RBP12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 PPP3CAQ08209 521 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 PRKAA1Q13131 559 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 NFYCQ13952 458 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 CYLC2Q14093 348 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 NR6A1Q15406 480 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 MFSD4BQ5TF39 518 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 RGMBQ6NW40 437 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 ADCK1Q86TW2 530 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 TMEM161BQ8NDZ6 487 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 EPS8L1Q8TE68 723 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 ZFYVE19Q96K21 471 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 TLR10Q9BXR5 811 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 TMCC3Q9ULS5 477 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 FZD1Q9UP38 647 aa12.25□□□□□ -0.45
AMBRA1-201ENST00000314845 CYP1A1P04798 512 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 USP17L7P0C7H9 530 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CYP2A6P11509 494 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 SERPINB5P36952 375 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CCNG1P51959 295 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 BNC2Q6ZN30 1099 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 DNAAF5Q86Y56 855 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 KATNAL2Q8IYT4 538 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 VPS50Q96JG6 964 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 PANX3Q96QZ0 392 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 APBA2Q99767 749 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 C2orf49Q9BVC5 232 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 PDGFDQ9GZP0 370 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 NAALADL1Q9UQQ1 740 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 FGF10O15520 208 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 ERVK-10P10266 1014 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CHI3L1P36222 383 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CLK1P49759 484 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 PLOD1Q02809 727 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CCDC153Q494R4 210 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 DEPDC1Q5TB30 811 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 NFKBIZQ9BYH8 718 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CEP41Q9BYV8 373 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 POLR1EQ9GZS1 481 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 NMRAL1Q9HBL8 299 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 RGS18Q9NS28 235 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 SF3B1O75533 1304 aaKnown RBP eCLIP12.24□□□□□ -0.454e-6■■■■■ 88
AMBRA1-201ENST00000314845 FAM237AA0A1B0GTK4 181 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 SNTNA6NMZ2 147 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 ADCY6O43306 1168 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 ARHGEF9O43307 516 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 SMIM10L2AP0DMW4 78 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 SMIM10L2BP0DMW5 78 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CCDC130P13994 396 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 PECAM1P16284 738 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 TPH1P17752 444 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 TARSP26639 723 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 MLH1P40692 756 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 NEK2P51955 445 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 RTP1P59025 263 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CDK16Q00536 496 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 KCNMA1Q12791 1236 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 ARMC12Q5T9G4 340 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 WSCD1Q658N2 575 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 TRMT11Q7Z4G4 463 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 MCOLN3Q8TDD5 553 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 BTN2A2Q8WVV5 523 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CCDC3Q9BQI4 270 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 PARVBQ9HBI1 364 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 MRPL17Q9NRX2 175 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 CDH9Q9ULB4 789 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 C2CD2Q9Y426 696 aa12.24□□□□□ -0.45
AMBRA1-201ENST00000314845 SIGLEC16A6NMB1 481 aa12.23□□□□□ -0.45
AMBRA1-201ENST00000314845 OR56A5P0C7T3 313 aa12.23□□□□□ -0.45
AMBRA1-201ENST00000314845 H2AFXP16104 143 aaPredicted RBP12.23□□□□□ -0.45
AMBRA1-201ENST00000314845 NPR3P17342 541 aa12.23□□□□□ -0.45
AMBRA1-201ENST00000314845 PLIN5Q00G26 463 aa12.23□□□□□ -0.45
AMBRA1-201ENST00000314845 DEFB115Q30KQ5 88 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms