RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 DNAI2Q9GZS0 605 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 PRDM12Q9H4Q4 367 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 PCDH10Q9P2E7 1040 aa12.82□□□□□ -0.36
RNF4-201ENST00000314289 CHADO15335 359 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 USP12O75317 370 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 LTFP02788 710 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 NCALDP61601 193 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 NAIF1Q69YI7 327 aaPredicted RBP12.81□□□□□ -0.36
RNF4-201ENST00000314289 OVOS1Q6IE37 1185 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 GPR152Q8TDT2 470 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 DCAKDQ8WVC6 231 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 CKAP2Q8WWK9 683 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 KCTD13Q8WZ19 329 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 KLHL29Q96CT2 875 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 P2RY11Q96G91 374 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 SIK2Q9H0K1 926 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 PLAC1Q9HBJ0 212 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 TDRD15B5MCY1 1934 aaKnown RBP12.81□□□□□ -0.36
RNF4-201ENST00000314289 CCDC189A1A4V9 331 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 HHLA1C9JL84 531 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 RNF103O00237 685 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 CLGNO14967 610 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 DDHD2O94830 711 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 SRGAP2BP0DMP2 458 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 ODC1P11926 461 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 ADRA1BP35368 520 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 SESN2P58004 480 aaPredicted RBP12.81□□□□□ -0.36
RNF4-201ENST00000314289 FAAP100Q0VG06 881 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 BMPR2Q13873 1038 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 ANKRD20A2Q5SQ80 823 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 ANKRD20A1Q5TYW2 823 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 ANKRD20A3Q5VUR7 823 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 SMYD5Q6GMV2 418 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 RFX8Q6ZV50 586 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 ZNF534Q76KX8 674 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 TMEM86AQ8N2M4 240 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 NT5C3BQ969T7 300 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 SMARCD1Q96GM5 515 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 CELF6Q96J87 481 aaKnown RBP12.81□□□□□ -0.36
RNF4-201ENST00000314289 WDR6Q9NNW5 1121 aaKnown RBP12.81□□□□□ -0.36
RNF4-201ENST00000314289 SLC17A7Q9P2U7 560 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 HCSTQ9UBK5 93 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 CDH9Q9ULB4 789 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 TRIM33Q9UPN9 1127 aa12.81□□□□□ -0.36
RNF4-201ENST00000314289 CFAP73A6NFT4 308 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 SNX3O60493 162 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 CKBP12277 381 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 ERCC2P18074 760 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 ADRA1DP25100 572 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 PEX19P40855 299 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 PTK7Q13308 1070 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 CES3Q6UWW8 571 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 MRPL10Q7Z7H8 261 aaKnown RBP12.8□□□□□ -0.36
RNF4-201ENST00000314289 NPWQ8N729 165 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 COLGALT1Q8NBJ5 622 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 QKIQ96PU8 341 aaKnown RBP eCLIP12.8□□□□□ -0.36
RNF4-201ENST00000314289 SLC2A13Q96QE2 648 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 TKTL2Q9H0I9 626 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 EBF2Q9HAK2 575 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 CYLDQ9NQC7 956 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 SMYD2Q9NRG4 433 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 DNAJB4Q9UDY4 337 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 IKBKGQ9Y6K9 419 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 SHROOM3Q8TF72 1996 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.8□□□□□ -0.36
RNF4-201ENST00000314289 MSI1O43347 362 aaKnown RBP12.8□□□□□ -0.36
RNF4-201ENST00000314289 PSMB4P28070 264 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 PCSK1P29120 753 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 DSC3Q14574 896 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 LVRNQ6Q4G3 990 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 PPP1R21Q6ZMI0 780 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 RNF180Q86T96 592 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 ECHDC2Q86YB7 292 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 SCN4BQ8IWT1 228 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 RAET1EQ8TD07 263 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 RSPH1Q8WYR4 309 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 RTP4Q96DX8 246 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 SERAC1Q96JX3 654 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 TSPAN18Q96SJ8 248 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 CYTH2Q99418 400 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 NOP53Q9NZM5 478 aaKnown RBP12.8□□□□□ -0.36
RNF4-201ENST00000314289 SFMBT1Q9UHJ3 866 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 USP15Q9Y4E8 981 aaPredicted RBP12.8□□□□□ -0.36
RNF4-201ENST00000314289 KRT16P08779 473 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 ATP2A2P16615 1042 aaKnown RBP12.8□□□□□ -0.36
RNF4-201ENST00000314289 TAC1P20366 129 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 SCNN1AP37088 669 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 PBX3P40426 434 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 OR1G1P47890 313 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 TUSC3Q13454 348 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 CGB2Q6NT52 195 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 ADGRD1Q6QNK2 874 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 ARCQ7LC44 396 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 BHLHA9Q7RTU4 235 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 METTL23Q86XA0 190 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 RIBC1Q8N443 379 aaPredicted RBP12.8□□□□□ -0.36
RNF4-201ENST00000314289 KCNV2Q8TDN2 545 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 TCP10LQ8TDR4 215 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 SPDL1Q96EA4 605 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 GLT1D1Q96MS3 346 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms