RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 CTXN3Q4LDR2 81 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 SLC45A4Q5BKX6 768 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 CPNE8Q86YQ8 564 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 MAML1Q92585 1016 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 ZNF184Q99676 751 aaPredicted RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 SAR1AQ9NR31 198 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 TLR9Q9NR96 1032 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 MRPL17Q9NRX2 175 aaKnown RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 KRT82Q9NSB4 513 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 DDX43Q9NXZ2 648 aaKnown RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 ASIC3Q9UHC3 531 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 PCDHB4Q9Y5E5 795 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 A8MXQ7 604 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 M0QZQ0 153 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 ZSCAN9O15535 394 aaPredicted RBP13.13□□□□□ -0.31
VANGL1-201ENST00000310260 COQ9O75208 318 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 PSMG1O95456 288 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 OR4Q2P0C623 313 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 IGFBP4P22692 258 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 ITGA8P53708 1063 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 PSMC1P62191 440 aaKnown RBP13.13□□□□□ -0.31
VANGL1-201ENST00000310260 GRIN2CQ14957 1233 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 Q7L0L9 218 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 NLRP9Q7RTR0 991 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 OSTM1Q86WC4 334 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 RBM12BQ8IXT5 1001 aaKnown RBP13.13□□□□□ -0.31
VANGL1-201ENST00000310260 SLC20A1Q8WUM9 679 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 KREMEN1Q96MU8 473 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 PWWP2AQ96N64 755 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 SAMD11Q96NU1 681 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 TMEM209Q96SK2 561 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 SPATA16Q9BXB7 569 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 CISHQ9NSE2 258 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 ATXN10Q9UBB4 475 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 HIDE1A8MVS5 230 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 PER2O15055 1255 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 PRPF4O43172 522 aaKnown RBP eCLIP13.13□□□□□ -0.31
VANGL1-201ENST00000310260 SPAG7O75391 227 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 PENKP01210 267 aaPredicted RBP13.13□□□□□ -0.31
VANGL1-201ENST00000310260 UBTFL6P0CB48 400 aaPredicted RBP13.13□□□□□ -0.31
VANGL1-201ENST00000310260 FGFR3P22607 806 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 NDST1P52848 882 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 MFAP3P55082 362 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 PTK6Q13882 451 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 SPARCL1Q14515 664 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 MESDQ14696 234 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 HHATQ5VTY9 493 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 ACOT1Q86TX2 421 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 TRABD2AQ86V40 505 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 TOP6BLQ8N6T0 577 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 KBTBD7Q8WVZ9 684 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 HAPLN3Q96S86 360 aa13.13□□□□□ -0.31
VANGL1-201ENST00000310260 STX18Q9P2W9 335 aaKnown RBP13.13□□□□□ -0.31
VANGL1-201ENST00000310260 ADAM12O43184 909 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 LPXNO60711 386 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 LYNP07948 512 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 SPATA31D3P0C874 917 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 SSTR3P32745 418 aaPredicted RBP13.12□□□□□ -0.31
VANGL1-201ENST00000310260 OR1D2P34982 312 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 NEK3P51956 506 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 ZRSR2Q15696 482 aaKnown RBP13.12□□□□□ -0.31
VANGL1-201ENST00000310260 PSMD5Q16401 504 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 HABP4Q5JVS0 413 aaKnown RBP13.12□□□□□ -0.31
VANGL1-201ENST00000310260 ZNF697Q5TEC3 545 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 RSPO2Q6UXX9 243 aaPredicted RBP13.12□□□□□ -0.31
VANGL1-201ENST00000310260 SPATA31D4Q6ZUB0 917 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 ARHGAP18Q8N392 663 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 C1orf54Q8WWF1 131 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 PTCD3Q96EY7 689 aaKnown RBP13.12□□□□□ -0.31
VANGL1-201ENST00000310260 NR1H4Q96RI1 486 aaPredicted RBP13.12□□□□□ -0.31
VANGL1-201ENST00000310260 VCX3BQ9H321 246 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 DPEP3Q9H4B8 488 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 VRTNQ9H8Y1 702 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 VCX3AQ9NNX9 186 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 CHORDC1Q9UHD1 332 aaPredicted RBP13.12□□□□□ -0.31
VANGL1-201ENST00000310260 DSEQ9UL01 958 aa13.12□□□□□ -0.31
VANGL1-201ENST00000310260 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 FOXN3O00409 490 aaPredicted RBP13.11□□□□□ -0.31
VANGL1-201ENST00000310260 SYN3O14994 580 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 MAP3K7O43318 606 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 MTA2O94776 668 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 STAU1O95793 577 aaKnown RBP13.11□□□□□ -0.31
VANGL1-201ENST00000310260 TBXAS1P24557 533 aaPredicted RBP13.11□□□□□ -0.31
VANGL1-201ENST00000310260 GCAP28676 217 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 SLC18A1P54219 525 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 CAMK1Q14012 370 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 STAT4Q14765 748 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 KIAA0319Q5VV43 1072 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 OTOAQ7RTW8 1153 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 MTDHQ86UE4 582 aaKnown RBP13.11□□□□□ -0.31
VANGL1-201ENST00000310260 RIBC1Q8N443 379 aaPredicted RBP13.11□□□□□ -0.31
VANGL1-201ENST00000310260 WDR60Q8WVS4 1066 aa13.11□□□□□ -0.31
VANGL1-201ENST00000310260 HEXIM2Q96MH2 286 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms