RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 RSPH3Q86UC2 560 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 SH3TC2Q8TF17 1288 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 USP6NLQ92738 828 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 LRRC39Q96DD0 335 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 CCDC106Q9BWC9 280 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 WWP1Q9H0M0 922 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 XPNPEP3Q9NQH7 507 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 CORO1CQ9ULV4 474 aaPredicted RBP21.47■■□□□ 1.03
RELA-201ENST00000308639 PLXNA1Q9UIW2 1896 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 ADCY6O43306 1168 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 USP12O75317 370 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 TKTP29401 623 aaKnown RBP21.47■■□□□ 1.03
RELA-201ENST00000308639 MLH1P40692 756 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 MXRA7P84157 204 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 LAMC2Q13753 1193 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 TFB1MQ8WVM0 346 aaKnown RBP21.47■■□□□ 1.03
RELA-201ENST00000308639 KBTBD7Q8WVZ9 684 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 PANX3Q96QZ0 392 aa21.47■■□□□ 1.03
RELA-201ENST00000308639 ZSWIM8A7E2V4 1837 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 USP1O94782 785 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 SORBS2O94875 1100 aaKnown RBP21.46■■□□□ 1.03
RELA-201ENST00000308639 STAU1O95793 577 aaKnown RBP21.46■■□□□ 1.03
RELA-201ENST00000308639 C6orf222P0C671 652 aaPredicted RBP21.46■■□□□ 1.03
RELA-201ENST00000308639 ERVK-10P10266 1014 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 ACADSP16219 412 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 IGFBP6P24592 240 aaPredicted RBP21.46■■□□□ 1.03
RELA-201ENST00000308639 PSMB4P28070 264 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 STILQ15468 1287 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 VWA5B1Q5TIE3 1220 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 RIPOR1Q6ZS17 1223 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 ARNTL2Q8WYA1 636 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 MTBPQ96DY7 904 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 OSMRQ99650 979 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 SYBUQ9NX95 663 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 PLA2G4CQ9UP65 541 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 USP3Q9Y6I4 520 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 CREB3O43889 395 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 PTPN9P43378 593 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 RBBP5Q15291 538 aaKnown RBP21.46■■□□□ 1.03
RELA-201ENST00000308639 PACS1Q6VY07 963 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 SLC26A9Q7LBE3 791 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 DEFB106AQ8N104 65 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 CCNYQ8ND76 341 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 CENPIQ92674 756 aaPredicted RBP21.46■■□□□ 1.03
RELA-201ENST00000308639 PNPOQ9NVS9 261 aa21.46■■□□□ 1.03
RELA-201ENST00000308639 RNF103O00237 685 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 CLDN5O00501 218 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 FGF3P11487 239 aaPredicted RBP21.45■■□□□ 1.02
RELA-201ENST00000308639 PEX6Q13608 980 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 MBLAC2Q68D91 279 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 TMPRSS6Q8IU80 811 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 TRIM42Q8IWZ5 723 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 ULK2Q8IYT8 1036 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 AZIN2Q96A70 460 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 SNX27Q96L92 541 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 KRT82Q9NSB4 513 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 SLC7A8Q9UHI5 535 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 TAGLN3Q9UI15 199 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 SLC25A3Q00325 362 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 TEDDM1Q5T9Z0 273 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 C9orf57Q5W0N0 161 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 TMEM154Q6P9G4 183 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 CATSPER4Q7RTX7 472 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 MAVSQ7Z434 540 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 CMC1Q7Z7K0 106 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 SCUBE1Q8IWY4 988 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 LMNTD2Q8IXW0 634 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 P2RY11Q96G91 374 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 AGAP3Q96P47 875 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 ACSS2Q9NR19 701 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 MKS1Q9NXB0 559 aa21.45■■□□□ 1.02
RELA-201ENST00000308639 A0A0A0MRY4 1105 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.44■■□□□ 1.02
RELA-201ENST00000308639 SPECC1L-ADORA2AF8WAN1 911 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 KCNK1O00180 336 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 DGKIO75912 1065 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 BEST1O76090 585 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 RECQL4O94761 1208 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 SNUPNO95149 360 aaKnown RBP21.44■■□□□ 1.02
RELA-201ENST00000308639 PRKCGP05129 697 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 NDUFV1P49821 464 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 SULT1E1P49888 294 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 NIPAL4Q0D2K0 466 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 BST2Q10589 180 aaKnown RBP21.44■■□□□ 1.02
RELA-201ENST00000308639 CBLBQ13191 982 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 DCAF6Q58WW2 860 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 C10orf107Q8IVU9 208 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 FAM136AQ96C01 138 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 SPATA13Q96N96 652 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 ANKRD27Q96NW4 1050 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 OLFM3Q96PB7 478 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 OXCT2Q9BYC2 517 aaPredicted RBP21.44■■□□□ 1.02
RELA-201ENST00000308639 RNF39Q9H2S5 420 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 CACNG4Q9UBN1 327 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 ASB14A6NK59 587 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 ENO4A6NNW6 628 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 CXCL11O14625 94 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 AP1G2O75843 785 aa21.44■■□□□ 1.02
RELA-201ENST00000308639 ACAT1P24752 427 aaKnown RBP21.44■■□□□ 1.02
RELA-201ENST00000308639 ADIGQ0VDE8 80 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms