RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 CACNA1AO00555 2505 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 LAMA1P25391 3075 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 TYW5A2RUC4 315 aaKnown RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 PATE3B3GLJ2 98 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 SLC30A4O14863 429 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 SYNCRIPO60506 623 aaKnown RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 GRAP2O75791 330 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 APOEP02649 317 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 EEF1GP26641 437 aaKnown RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 CLCN1P35523 988 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 YWHAZP63104 245 aaKnown RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 KCNMA1Q12791 1236 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 DRAP1Q14919 205 aaPredicted RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 EIF4HQ15056 248 aaKnown RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 FUT11Q495W5 492 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 FNDC3BQ53EP0 1204 aaKnown RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 DCAF6Q58WW2 860 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 PIK3R6Q5UE93 754 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 TMEM215Q68D42 235 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 IL31Q6EBC2 164 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 NADSYN1Q6IA69 706 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 OR6B2Q6IFH4 312 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 SERPINA13PQ6UXR4 307 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 CHST9Q7L1S5 443 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 WDTC1Q8N5D0 677 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 MRGPRX1Q96LB2 322 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 DDX50Q9BQ39 737 aaKnown RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 NUCKS1Q9H1E3 243 aaKnown RBP17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 VPS16Q9H269 839 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 CD93Q9NPY3 652 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 GGA2Q9UJY4 613 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 PCDHGC3Q9UN70 934 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 CEP83Q9Y592 693 aa17.7■□□□□ 0.42
HMGCLL1-202ENST00000308161 TRUB2O95900 331 aaKnown RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 EPHX1P07099 455 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 PABPC1P11940 636 aaKnown RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 HLA-EP13747 358 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 PRKCHP24723 683 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 RPS24P62847 133 aaKnown RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 PITX1P78337 314 aaPredicted RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 ZC3H12AQ5D1E8 599 aaKnown RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 CT47A1Q5JQC4 288 aaPredicted RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 TAF3Q5VWG9 929 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 LYSMD4Q5XG99 296 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 RNF43Q68DV7 783 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 MFN1Q8IWA4 741 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 DEFB106AQ8N104 65 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 CFAP52Q8N1V2 620 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 CARNMT1Q8N4J0 409 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 ZNF366Q8N895 744 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 HJURPQ8NCD3 748 aaPredicted RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 WFDC5Q8TCV5 224 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 WFIKKN2Q8TEU8 576 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 MYEOVQ96EZ4 313 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 PRICKLE1Q96MT3 831 aaPredicted RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 EDEM2Q9BV94 578 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 CD248Q9HCU0 757 aa17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 XPO7Q9UIA9 1087 aaKnown RBP17.69■□□□□ 0.42
HMGCLL1-202ENST00000308161 SPTBN2O15020 2390 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 IGHV1OR15-9A0A0B4J2B8 117 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 KHNYNO15037 678 aaKnown RBP17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 NPC1O15118 1278 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 IRAK2O43187 625 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 ZNF217O75362 1048 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 ERBB2P04626 1255 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 TPM2P07951 284 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 CD70P32970 193 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 NNTQ13423 1086 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 E2F5Q15329 346 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 STPG1Q5TH74 334 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 KLHDC7AQ5VTJ3 777 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 RAP1GAP2Q684P5 730 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 SLC36A4Q6YBV0 504 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 C11orf57Q6ZUT1 292 aaPredicted RBP17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 FAM183BPQ6ZVS7 135 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 CHSY1Q86X52 802 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 CCDC117Q8IWD4 279 aaPredicted RBP17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 FAM71AQ8IYT1 594 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 AHI1Q8N157 1196 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 ENOX1Q8TC92 643 aaKnown RBP17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 RNF34Q969K3 372 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 SLC39A13Q96H72 371 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 LHX5Q9H2C1 402 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 PRDM16Q9HAZ2 1276 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 PLA2G4CQ9UP65 541 aa17.68■□□□□ 0.42
HMGCLL1-202ENST00000308161 AP5Z1O43299 807 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 TIMM44O43615 452 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 NDUFS2O75306 463 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 ITPKAP23677 461 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 BPIFB4P59827 614 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 CDK17Q00537 523 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 CDH18Q13634 790 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 KRT31Q15323 416 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 PTPN20Q4JDL3 420 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 EFHC1Q5JVL4 640 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 MBLAC2Q68D91 279 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 BEND5Q7L4P6 421 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 LGI2Q8N0V4 545 aa17.67■□□□□ 0.42
HMGCLL1-202ENST00000308161 NUP205Q92621 2012 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms