RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MIB1Q86YT6 1006 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 SIK2Q9H0K1 926 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 CCSER2Q9H7U1 834 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 DNMT3LQ9UJW3 386 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 PCDHA11Q9Y5I1 949 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 GRXCR1A8MXD5 290 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 GLUD1P00367 558 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 LRG1P02750 347 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 ITIH2P19823 946 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 RING1Q06587 406 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 TRIP13Q15645 432 aaPredicted RBP18.12■□□□□ 0.49
KRT28-201ENST00000306658 KCTD19Q17RG1 926 aaPredicted RBP18.12■□□□□ 0.49
KRT28-201ENST00000306658 ACBD5Q5T8D3 534 aaPredicted RBP18.12■□□□□ 0.49
KRT28-201ENST00000306658 KLHDC10Q6PID8 442 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 ATP6V0D2Q8N8Y2 350 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 BBOF1Q8ND07 529 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 SNF8Q96H20 258 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 FCRL2Q96LA5 508 aaPredicted RBP18.12■□□□□ 0.49
KRT28-201ENST00000306658 C1orf74Q96LT6 269 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 TGS1Q96RS0 853 aaKnown RBP18.12■□□□□ 0.49
KRT28-201ENST00000306658 NACA2Q9H009 215 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 WHRNQ9P202 907 aa18.12■□□□□ 0.49
KRT28-201ENST00000306658 SLC12A8A0AV02 714 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 CFAP69A5D8W1 941 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 ATP8B1O43520 1251 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 LRIG2O94898 1065 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 CA3P07451 260 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 ERCC2P18074 760 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 DNAJB1P25685 340 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 EPHB2P29323 1055 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 TUBP50607 506 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 GBE1Q04446 702 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 PAFAH1B3Q15102 231 aaKnown RBP18.11■□□□□ 0.49
KRT28-201ENST00000306658 PABPC1LQ4VXU2 614 aaKnown RBP18.11■□□□□ 0.49
KRT28-201ENST00000306658 HDXQ7Z353 690 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 KREMEN2Q8NCW0 462 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 CAVIN3Q969G5 261 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 PCDH9Q9HC56 1237 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 ETNK2Q9NVF9 386 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 ZNF446Q9NWS9 450 aa18.11■□□□□ 0.49
KRT28-201ENST00000306658 HBS1LQ9Y450 684 aaKnown RBP18.11■□□□□ 0.49
KRT28-201ENST00000306658 CEP290O15078 2479 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 HIDE1A8MVS5 230 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 DCLK1O15075 740 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 MOCS2O96007 188 aaPredicted RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 IFNB1P01574 187 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 ECHS1P30084 290 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 TNNT3P45378 269 aaPredicted RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 PLTPP55058 493 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 MLLT6P55198 1093 aaPredicted RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 NRG1Q02297 640 aaPredicted RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 COL13A1Q5TAT6 717 aaPredicted RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 FAM109BQ6ICB4 259 aaPredicted RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 PDE12Q6L8Q7 609 aaKnown RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 RTL10Q7L3V2 364 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 MTERF4Q7Z6M4 381 aaKnown RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 CDKL3Q8IVW4 592 aaPredicted RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 ELMOD1Q8N336 334 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 BTN2A3PQ96KV6 586 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 GRHL1Q9NZI5 618 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 DTLQ9NZJ0 730 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 RAD54BQ9Y620 910 aa18.1■□□□□ 0.49
KRT28-201ENST00000306658 LAMA2P24043 3122 aaKnown RBP18.1■□□□□ 0.49
KRT28-201ENST00000306658 BCLAF3A2AJT9 711 aaKnown RBP18.09■□□□□ 0.49
KRT28-201ENST00000306658 NDC80O14777 642 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 C1RP00736 705 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 IGLV3-27P01718 113 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 C8AP07357 584 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 SRGAP2BP0DMP2 458 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 CAV1Q03135 178 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 SLC10A2Q12908 348 aaPredicted RBP18.09■□□□□ 0.49
KRT28-201ENST00000306658 NUGGCQ68CJ6 796 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 UNC45BQ8IWX7 931 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 LRRC45Q96CN5 670 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 FMO2Q99518 471 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 MTRF1LQ9UGC7 380 aaKnown RBP18.09■□□□□ 0.49
KRT28-201ENST00000306658 SNX10Q9Y5X0 201 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 HACD1B0YJ81 288 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 GRM6O15303 877 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 FGF10O15520 208 aaPredicted RBP18.09■□□□□ 0.49
KRT28-201ENST00000306658 ARHGEF15O94989 841 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 CSPG5O95196 566 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 IVDP26440 423 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 SERPINB6P35237 376 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 ACTN2P35609 894 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 VPS41P49754 854 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 ERVK-21P61565 698 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 COG7P83436 770 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 PDK1Q15118 436 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 SLC45A4Q5BKX6 768 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 RWDD4Q6NW29 188 aaKnown RBP18.09■□□□□ 0.49
KRT28-201ENST00000306658 FAM71DQ8N9W8 422 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 ART4Q93070 314 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 TBC1D31Q96DN5 1066 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 FERMT1Q9BQL6 677 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 FUT8Q9BYC5 575 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 CATSPERBQ9H7T0 1116 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 C10orf88Q9H8K7 445 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 ZDHHC18Q9NUE0 388 aa18.09■□□□□ 0.49
KRT28-201ENST00000306658 HS3ST4Q9Y661 456 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms