RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ZNF229Q9UJW7 825 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 LTFP02788 710 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 CKBP12277 381 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 MYL4P12829 197 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 KDELR1P24390 212 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 NME5P56597 212 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 CHRNB3Q05901 458 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 PRKAA1Q13131 559 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 CYP51A1Q16850 503 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 ATP6AP1LQ52LC2 224 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 ZCCHC9Q8N567 271 aaKnown RBP16.32■□□□□ 0.2
USP42-201ENST00000306177 ATXN2LQ8WWM7 1075 aaKnown RBP16.32■□□□□ 0.2
USP42-201ENST00000306177 PRR23AA6NEV1 266 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 USP1O94782 785 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 CRABP2P29373 138 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 LRRN4CLQ8ND94 238 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 ZSWIM2Q8NEG5 633 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 PGLYRP2Q96PD5 576 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 TUBGCP4Q9UGJ1 667 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 PNMA8BQ9ULN7 279 aaPredicted RBP16.32■□□□□ 0.2
USP42-201ENST00000306177 IPPQ9Y573 584 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 SIGLEC1Q9BZZ2 1709 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 SIGLEC16A6NMB1 481 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 NR5A2O00482 541 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 XPO1O14980 1071 aaKnown RBP16.32■□□□□ 0.2
USP42-201ENST00000306177 UBDO15205 165 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 MAFO75444 373 aaPredicted RBP16.32■□□□□ 0.2
USP42-201ENST00000306177 ALDH1A2O94788 518 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 UBOX5O94941 541 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 PRKAA2P54646 552 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 NAB1Q13506 487 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 TINF2Q9BSI4 451 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 CASZ1Q86V15 1759 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 MED1Q15648 1581 aaPredicted RBP16.31■□□□□ 0.2
USP42-201ENST00000306177 ERI2A8K979 691 aaKnown RBP16.31■□□□□ 0.2
USP42-201ENST00000306177 SLC1A6P48664 564 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 TBL1YQ9BQ87 522 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 KCNK1O00180 336 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 CYP1A2P05177 515 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 BEX3Q00994 111 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 DPYSL3Q14195 570 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 CNGA2Q16280 664 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 CENPLQ8N0S6 344 aaPredicted RBP16.31■□□□□ 0.2
USP42-201ENST00000306177 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
USP42-201ENST00000306177 SENP8Q96LD8 212 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 PPP1R10Q96QC0 940 aaKnown RBP16.31■□□□□ 0.2
USP42-201ENST00000306177 DCLRE1BQ9H816 532 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 DLGAP2Q9P1A6 1054 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 RUNX1T1Q06455 604 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 MAMLD1Q13495 774 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 SLC39A12Q504Y0 691 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 CASP10Q92851 521 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 PGM2Q96G03 612 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 ZFYVE19Q96K21 471 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 CNBD2Q96M20 576 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 SH3GL1Q99961 368 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 TKTL2Q9H0I9 626 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 ELOVL6Q9H5J4 265 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 CAAP1Q9H8G2 361 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 TCF7L2Q9NQB0 619 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 TAS2R14Q9NYV8 317 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 LNPEPQ9UIQ6 1025 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 BCL9LQ86UU0 1499 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 ARHGEF9O43307 516 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 DDHD2O94830 711 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 USP17L7P0C7H9 530 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 ZNF23P17027 643 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 CSTF3Q12996 717 aaKnown RBP16.31■□□□□ 0.2
USP42-201ENST00000306177 FAM71AQ8IYT1 594 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 HSD17B14Q9BPX1 270 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 ULBP1Q9BZM6 244 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 ANKRD6Q9Y2G4 727 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 SPACA6W5XKT8 324 aa16.31■□□□□ 0.2
USP42-201ENST00000306177 NFAT5O94916 1531 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 PQBP1O60828 265 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 TRIM13O60858 407 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 RBL1P28749 1068 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 PBLDP30039 288 aaPredicted RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 LRRC39Q96DD0 335 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 GAD1Q99259 594 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 MAGEA13PA6NCF6 341 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 M0R3G1 203 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 TRDMT1O14717 391 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 ATP9AO75110 1047 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 BDNFP23560 247 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 NOS2P35228 1153 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 TRPC1P48995 793 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 NCKAP1LP55160 1127 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 LRRC38Q5VT99 294 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 DIS3LQ8TF46 1054 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 THAP1Q9NVV9 213 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 DDX20Q9UHI6 824 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 SNX13Q9Y5W8 968 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 WNT7AO00755 349 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 TUFMP49411 452 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 CLK1P49759 484 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 CCNG1P51959 295 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 CDC16Q13042 620 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms