RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 PHF13Q86YI8 300 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 CACNA2D3Q8IZS8 1091 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 CSGALNACT1Q8TDX6 532 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 GIPC2Q8TF65 315 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 CLDN23Q96B33 292 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 RSPRY1Q96DX4 576 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 SCYL1Q96KG9 808 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 SERPINB12Q96P63 405 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 SEPT5Q99719 369 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 PI4K2AQ9BTU6 479 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 OSBPL6Q9BZF3 934 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 DCLK3Q9C098 648 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 SMG9Q9H0W8 520 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 PLEKHA5Q9HAU0 1116 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 ZSCAN32Q9NX65 697 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 AGO2Q9UKV8 859 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 USP18Q9UMW8 372 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 UBQLN1Q9UMX0 589 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 PLXNA3P51805 1871 aa8.15□□□□□ -1.1
TM4SF1-201ENST00000305366 SPTLC1O15269 473 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 OGTO15294 1046 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 TCEA3O75764 348 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 OAZ2O95190 189 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 NFICP08651 508 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 CHN1P15882 459 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 RRM1P23921 792 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 HOXC13P31276 330 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 PIK3CAP42336 1068 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 NSFP46459 744 aaKnown RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 KCNJ1P48048 391 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 LILRA4P59901 499 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 NOMO3P69849 1222 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 IFT88Q13099 833 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 SRSF5Q13243 272 aaKnown RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 KLF1Q13351 362 aaPredicted RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 CUL2Q13617 745 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 AUHQ13825 339 aaKnown RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 CCNG2Q16589 344 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 ZNF528Q3MIS6 628 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 MGAT5BQ3V5L5 792 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 GPR158Q5T848 1215 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 EGFLAMQ63HQ2 1017 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 PLEKHA7Q6IQ23 1121 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 CRELD2Q6UXH1 353 aaPredicted RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 CCDC121Q6ZUS5 278 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 TAOK1Q7L7X3 1001 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 DNAJB7Q7Z6W7 309 aaPredicted RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 RELL1Q8IUW5 271 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 ARID3BQ8IVW6 561 aaPredicted RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 RHOT1Q8IXI2 618 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 BBOF1Q8ND07 529 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 BEST2Q8NFU1 509 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 ATL2Q8NHH9 583 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 DNASE1L2Q92874 299 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 SNF8Q96H20 258 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 SENP8Q96LD8 212 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 CGRRF1Q99675 332 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 LPIN3Q9BQK8 851 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 MRPL47Q9HD33 250 aaKnown RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 SMG5Q9UPR3 1016 aaKnown RBP8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 NEU2Q9Y3R4 380 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 PCDHGA2Q9Y5H1 932 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 SCINQ9Y6U3 715 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 CAPN7Q9Y6W3 813 aa8.15□□□□□ -1.11
TM4SF1-201ENST00000305366 A0A0B4J269 797 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 TLDC2A0PJX2 215 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 FAM170AA1A519 330 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 OR6C75A6NL08 312 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 M0QZQ0 153 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 XPOTO43592 962 aaKnown RBP8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 VNN1O95497 513 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 TNNI1P19237 187 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 GABRR2P28476 465 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 ATP5DP30049 168 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 LRPAP1P30533 357 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 RPS9P46781 194 aaKnown RBP8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 AP3M2P53677 418 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 IFI35P80217 286 aaPredicted RBP8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 CYP4F8P98187 520 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 SATB1Q01826 763 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 DMWDQ09019 674 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 GPR17Q13304 367 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 ITIH4Q14624 930 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 PUM1Q14671 1186 aaKnown RBP eCLIP8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 ZBTB6Q15916 424 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 KCTD19Q17RG1 926 aaPredicted RBP8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 SLC39A12Q504Y0 691 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 C9orf57Q5W0N0 161 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 CEP128Q6ZU80 1094 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 CPLX4Q7Z7G2 160 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 MFSD6LQ8IWD5 586 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 KATNAL2Q8IYT4 538 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 MDM1Q8TC05 714 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 CABS1Q96KC9 395 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 CDC42EP4Q9H3Q1 356 aaKnown RBP8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 GTSE1Q9NYZ3 720 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 RAB23Q9ULC3 237 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 C2orf16Q68DN1 1984 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 FAM186AA6NE01 2351 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms