RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 USP33Q8TEY7 942 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 WNT8BQ93098 351 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 ZIC5Q96T25 663 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 RNPEPL1Q9HAU8 725 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 RXFP1Q9HBX9 757 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 SRRM3A6NNA2 597 aaPredicted RBP10.42□□□□□ -0.74
FOXN4-201ENST00000299162 GOLGA8TH3BQL2 631 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 SRGAP2BP0DMP2 458 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 GABRB2P47870 512 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 TKTL1P51854 596 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 VPS52Q8N1B4 723 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 USP6NLQ92738 828 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 MCUR1Q96AQ8 359 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 MAGEB18Q96M61 343 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 TBC1D10AQ9BXI6 508 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 USP29Q9HBJ7 922 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.42□□□□□ -0.74
FOXN4-201ENST00000299162 CDY2AQ9Y6F7 541 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 M0QZ92 97 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 NVLO15381 856 aaKnown RBP10.42□□□□□ -0.74
FOXN4-201ENST00000299162 B3GAT3O94766 335 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 BGNP21810 368 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 CALB2P22676 271 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 CACNA2D1P54289 1103 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 CFAP157Q5JU67 520 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 ZCCHC23Q6ZST2 131 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 TMEM110Q86TL2 294 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 ANKRD52Q8NB46 1076 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 PTPRN2Q92932 1015 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 UTP4Q969X6 686 aaKnown RBP10.42□□□□□ -0.74
FOXN4-201ENST00000299162 CELF6Q96J87 481 aaKnown RBP10.42□□□□□ -0.74
FOXN4-201ENST00000299162 CSPG4P5Q96PW8 444 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 ULBP1Q9BZM6 244 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 ACSS2Q9NR19 701 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 MIOSQ9NXC5 875 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 ST3GAL5Q9UNP4 418 aa10.42□□□□□ -0.74
FOXN4-201ENST00000299162 NRP1O14786 923 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 MFSD11O43934 449 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 L1CAMP32004 1257 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 THPOP40225 353 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 BRCC3P46736 316 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 PGGT1BP53609 377 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 YWHAZP63104 245 aaKnown RBP10.41□□□□□ -0.74
FOXN4-201ENST00000299162 CUL3Q13618 768 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 GPRIN1Q7Z2K8 1008 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 GBP7Q8N8V2 638 aaPredicted RBP10.41□□□□□ -0.74
FOXN4-201ENST00000299162 SMG8Q8ND04 991 aaKnown RBP10.41□□□□□ -0.74
FOXN4-201ENST00000299162 STK32AQ8WU08 396 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 STMN2Q93045 179 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 SLC4A5Q9BY07 1137 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 ARHGEF3Q9NR81 526 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 TXLNGQ9NUQ3 528 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 LGALS13Q9UHV8 139 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 NUP205Q92621 2012 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 WDR27A2RRH5 827 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 FAM72CH0Y354 149 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 KRT36O76013 467 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 UNC5CO95185 931 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 ASMTLO95671 621 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 SP100P23497 879 aaPredicted RBP10.41□□□□□ -0.74
FOXN4-201ENST00000299162 STIP1P31948 543 aaKnown RBP10.41□□□□□ -0.74
FOXN4-201ENST00000299162 DEUP1Q05D60 604 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 FAM72AQ5TYM5 149 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 FAM72DQ6L9T8 149 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 PID1Q7Z2X4 250 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 FAM72BQ86X60 149 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 TTC16Q8NEE8 873 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 SENP8Q96LD8 212 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 ZNF560Q96MR9 790 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 PREBQ9HCU5 417 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 MORF4L1Q9UBU8 362 aa10.41□□□□□ -0.74
FOXN4-201ENST00000299162 GNEQ9Y223 722 aaKnown RBP10.41□□□□□ -0.74
FOXN4-201ENST00000299162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 YJEFN3A6XGL0 299 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 E7ENQ6 273 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 PTGESO14684 152 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 MOCS2O96007 188 aaPredicted RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 ZNF865P0CJ78 1059 aaPredicted RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 PTPN1P18031 435 aaKnown RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 TTC3P53804 2025 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 POU5F1BQ06416 359 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 TAF1BQ53T94 588 aaPredicted RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 KIAA0319Q5VV43 1072 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 RWDD4Q6NW29 188 aaKnown RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 SAPCD2Q86UD0 394 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 IFNLR1Q8IU57 520 aaPredicted RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 C3orf58Q8NDZ4 430 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 HIPK4Q8NE63 616 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 ZNF75CPQ92670 426 aaPredicted RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 PGBD4Q96DM1 585 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 DENND2DQ9H6A0 471 aaPredicted RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 ACSS3Q9H6R3 686 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 VRTNQ9H8Y1 702 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 DDIT4Q9NX09 232 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 DTLQ9NZJ0 730 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 PAK5Q9P286 719 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 COL1A2P08123 1366 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 PEX11AO75192 247 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 CD4P01730 458 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms