RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 NUP58Q9BVL2 599 aa20.44■□□□□ 0.86
CXCL3-201ENST00000296026 MIR1-1HGQ9H1L0 117 aa20.44■□□□□ 0.86
CXCL3-201ENST00000296026 ABCB8Q9NUT2 735 aa20.44■□□□□ 0.86
CXCL3-201ENST00000296026 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.44■□□□□ 0.86
CXCL3-201ENST00000296026 PLA2G4CQ9UP65 541 aa20.44■□□□□ 0.86
CXCL3-201ENST00000296026 PCNX2A6NKB5 2137 aa20.44■□□□□ 0.86
CXCL3-201ENST00000296026 METTL12A8MUP2 240 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 M0QYV0 167 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 PMM2O15305 246 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 BRD2P25440 801 aaKnown RBP20.43■□□□□ 0.86
CXCL3-201ENST00000296026 SGSHP51688 502 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 CAMK2GQ13555 558 aaPredicted RBP20.43■□□□□ 0.86
CXCL3-201ENST00000296026 HNRNPDQ14103 355 aaKnown RBP20.43■□□□□ 0.86
CXCL3-201ENST00000296026 FNDC3BQ53EP0 1204 aaKnown RBP20.43■□□□□ 0.86
CXCL3-201ENST00000296026 ADIPOR2Q86V24 386 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 FAM124AQ86V42 546 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 OR2T3Q8NH03 318 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 IRGQQ8WZA9 623 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 CAMK1GQ96NX5 476 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 ZDHHC5Q9C0B5 715 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 TMEM245Q9H330 911 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 GGA2Q9UJY4 613 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 MAN1B1Q9UKM7 699 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 KLK13Q9UKR3 277 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 NEUROG3Q9Y4Z2 214 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 FRYQ5TBA9 3013 aa20.43■□□□□ 0.86
CXCL3-201ENST00000296026 MUC22E2RYF6 1773 aaPredicted RBP20.42■□□□□ 0.86
CXCL3-201ENST00000296026 SH3BP5O60239 455 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 CALCAP01258 141 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 IGLV3-27P01718 113 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 LTFP02788 710 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 PABPC1P11940 636 aaKnown RBP20.42■□□□□ 0.86
CXCL3-201ENST00000296026 RDXP35241 583 aaKnown RBP20.42■□□□□ 0.86
CXCL3-201ENST00000296026 PPP1R2P41236 205 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 NUCB2P80303 420 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 CETN1Q12798 172 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 STILQ15468 1287 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 KLHL10Q6JEL2 608 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 RFWD3Q6PCD5 774 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 KIAA0907Q7Z7F0 614 aaPredicted RBP20.42■□□□□ 0.86
CXCL3-201ENST00000296026 UNC45BQ8IWX7 931 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 AHI1Q8N157 1196 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 ZNF366Q8N895 744 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.42■□□□□ 0.86
CXCL3-201ENST00000296026 LMO3Q8TAP4 145 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 CLEC4CQ8WTT0 213 aa20.42■□□□□ 0.86
CXCL3-201ENST00000296026 EIF2B4Q9UI10 523 aaKnown RBP20.42■□□□□ 0.86
CXCL3-201ENST00000296026 GOLGA6L7A0A1B0GV03 622 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 TMEM8BA6NDV4 472 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 H0Y626 953 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 BCAT2O15382 392 aaPredicted RBP20.41■□□□□ 0.86
CXCL3-201ENST00000296026 TBL1XO60907 577 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 TRIM16O95361 564 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 SLC11A2P49281 568 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 PTPRNQ16849 979 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 PIK3R6Q5UE93 754 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 NUGGCQ68CJ6 796 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 MBLAC2Q68D91 279 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 TTI2Q6NXR4 508 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 RRAGAQ7L523 313 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 WFDC5Q8TCV5 224 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 GOLGA1Q92805 767 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 HSFY1Q96LI6 401 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 LHX5Q9H2C1 402 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 MSRB2Q9Y3D2 182 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 PCDHB9Q9Y5E1 797 aa20.41■□□□□ 0.86
CXCL3-201ENST00000296026 P4HA2O15460 535 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 ACSL4O60488 711 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 SLC6A4P31645 630 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 TBX4P57082 545 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 RING1Q06587 406 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 TRIP6Q15654 476 aaKnown RBP20.4■□□□□ 0.86
CXCL3-201ENST00000296026 FAM133BQ5BKY9 247 aaKnown RBP20.4■□□□□ 0.86
CXCL3-201ENST00000296026 MPP7Q5T2T1 576 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 NAXDQ8IW45 347 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 ARHGEF19Q8IW93 802 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 ELOA2Q8IYF1 753 aaPredicted RBP20.4■□□□□ 0.86
CXCL3-201ENST00000296026 CHCHD4Q8N4Q1 142 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 NELFBQ8WX92 580 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 IRX2Q9BZI1 471 aaPredicted RBP20.4■□□□□ 0.86
CXCL3-201ENST00000296026 MIS12Q9H081 205 aa20.4■□□□□ 0.86
CXCL3-201ENST00000296026 CACNA1EQ15878 2313 aa20.39■□□□□ 0.86
CXCL3-201ENST00000296026 PPP1R3GB7ZBB8 358 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 IRAK2O43187 625 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 FBXO21O94952 628 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 ATP5BP06576 529 aaKnown RBP20.39■□□□□ 0.85
CXCL3-201ENST00000296026 DLDP09622 509 aaKnown RBP20.39■□□□□ 0.85
CXCL3-201ENST00000296026 POLR2EP19388 210 aaKnown RBP20.39■□□□□ 0.85
CXCL3-201ENST00000296026 CD70P32970 193 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 ACSL1P33121 698 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 GCNT1Q02742 428 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 BECN1Q14457 450 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 ZNF423Q2M1K9 1284 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 EHBP1Q8NDI1 1231 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 SNX19Q92543 992 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 AZIN2Q96A70 460 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 PCED1AQ9H1Q7 454 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 IL21RQ9HBE5 538 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 PRSS16Q9NQE7 514 aa20.39■□□□□ 0.85
CXCL3-201ENST00000296026 STIM2Q9P246 746 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms