RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 FAM192AQ9GZU8 254 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 DDX4Q9NQI0 724 aaKnown RBP15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 CLIC5Q9NZA1 410 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 BAZ2BQ9UIF8 2168 aaKnown RBP15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 PPLO60437 1756 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 PDZK1P1A8MUH7 402 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 SLCO1B7G3V0H7 640 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 NELFEP18615 380 aaKnown RBP15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 ITGADQ13349 1161 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 DUPD1Q68J44 220 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 CHST13Q8NET6 341 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 PIDD1Q9HB75 910 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 FBXO6Q9NRD1 293 aaPredicted RBP15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 PRKAG2Q9UGJ0 569 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 ZNF862O60290 1169 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 TFAP2DQ7Z6R9 452 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 PHF21AQ96BD5 680 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 ETNK2Q9NVF9 386 aa15.69■□□□□ 0.1
SHROOM4-201ENST00000289292 F8W810 466 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 ABCB1P08183 1280 aaPredicted RBP15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 PCNAP12004 261 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 ME2P23368 584 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 GP5P40197 560 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 RAB14P61106 215 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 MAMLD1Q13495 774 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 SLC41A1Q8IVJ1 513 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 B3GALNT2Q8NCR0 500 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 WDR60Q8WVS4 1066 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 CACNA2D2Q9NY47 1150 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 ADAMTS13Q76LX8 1427 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 FRMPD4Q14CM0 1322 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 LIASO43766 372 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 TRIM13O60858 407 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 VPS26AO75436 327 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 GLP2RO95838 553 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 NCALDP61601 193 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 PDK3Q15120 406 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 NET1Q7Z628 596 aaPredicted RBP15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 BBS7Q8IWZ6 715 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 KATNAL2Q8IYT4 538 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 COMMD8Q9NX08 183 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 KCNK4Q9NYG8 393 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 PCYOX1Q9UHG3 505 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 KPNA4O00629 521 aaPredicted RBP15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 ODC1P11926 461 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 AKAP5P24588 427 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 CENPAP49450 140 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 PRKAA1Q13131 559 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 NR6A1Q15406 480 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 UGT3A1Q6NUS8 523 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 MTFMTQ96DP5 389 aaKnown RBP15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 TPD52L3Q96J77 140 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 YIPF2Q9BWQ6 316 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 RIBC2Q9H4K1 309 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 RMND5AQ9H871 391 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 CCDC154A6NI56 674 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 MFN2O95140 757 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 ATP6V0D2Q8N8Y2 350 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 NCANO14594 1321 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 PRRG1O14668 218 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 CCNT2O60583 730 aaKnown RBP15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 VAPBO95292 243 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 RBP1P09455 135 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 PNPLA4P41247 253 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 SPANXN3Q5MJ09 141 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 FAM84AQ96KN4 292 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 GORASP1Q9BQQ3 440 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 NDUFAF1Q9Y375 327 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 PREX1Q8TCU6 1659 aa15.68■□□□□ 0.1
SHROOM4-201ENST00000289292 AVILO75366 819 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 LYPLA1O75608 230 aaPredicted RBP15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 CYP1A2P05177 515 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 MLNP12872 115 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 KDELR1P24390 212 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 EFEMP1Q12805 493 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 KCNT2Q6UVM3 1135 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 TMEM26Q6ZUK4 368 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 PARP8Q8N3A8 854 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 NETO2Q8NC67 525 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 UTP15Q8TED0 518 aaKnown RBP15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 PLA2G4CQ9UP65 541 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 AHCYL1O43865 530 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 BST2Q10589 180 aaKnown RBP15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 SLC45A4Q5BKX6 768 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 ZFPM1Q8IX07 1006 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 FNDC5Q8NAU1 212 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 TMEM165Q9HC07 324 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 STMN3Q9NZ72 180 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 ZMYM5Q9UJ78 669 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 ZMYM2Q9UBW7 1377 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 CASTOR2A6NHX0 329 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 PIGNO95427 931 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 XRRA1Q6P2D8 792 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 RBM44Q6ZP01 1051 aaKnown RBP15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 TMC7Q7Z402 723 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 STK32CQ86UX6 486 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 SYTL1Q8IYJ3 562 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 HAS1Q92839 578 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 MBOAT7Q96N66 472 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms