RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 ZNF77Q15935 545 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 DPYSL2Q16555 572 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 PAPD7Q5XG87 772 aaKnown RBP22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 HTR3DQ70Z44 454 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 FAM71BQ8TC56 605 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 KCTD15Q96SI1 283 aaPredicted RBP22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 NAPGQ99747 312 aaPredicted RBP22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 PRMT1Q99873 361 aaKnown RBP22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 OR12D3Q9UGF7 316 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 SP100P23497 879 aaPredicted RBP22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 KDELR1P24390 212 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 RWDD2BP57060 319 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 ZNF211Q13398 564 aaPredicted RBP22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 FAM133BQ5BKY9 247 aaKnown RBP22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 C14orf80Q86SX3 495 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 PSTKQ8IV42 348 aaKnown RBP22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 UBL4BQ8N7F7 174 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 ATP6V0D2Q8N8Y2 350 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 UBE2Q2Q8WVN8 375 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 AZIN2Q96A70 460 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 RNF25Q96BH1 459 aaPredicted RBP22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 MYEOVQ96EZ4 313 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 OSBPL2Q9H1P3 480 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 TRPV4Q9HBA0 871 aa22.58■■□□□ 1.2
PDLIM3-203ENST00000284771 CTAGE9A4FU28 777 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 KCNK3O14649 394 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 ACSL4O60488 711 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 SRGAP2O75044 1071 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 TCF3P15923 654 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 CASQ1P31415 396 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 SLC6A4P31645 630 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 GBP2P32456 591 aaPredicted RBP22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 CDH6P55285 790 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 AMPD2Q01433 879 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 TFF2Q03403 129 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 LLGL1Q15334 1064 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 EFHC2Q5JST6 749 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 TANGO2Q6ICL3 276 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 KCTD6Q8NC69 237 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 MAFAQ8NHW3 353 aaPredicted RBP22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 C1orf74Q96LT6 269 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 PCDH18Q9HCL0 1135 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 STOML2Q9UJZ1 356 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 SNX12Q9UMY4 172 aa22.57■■□□□ 1.2
PDLIM3-203ENST00000284771 ZRANB2O95218 330 aaKnown RBP eCLIP22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 USP4Q13107 963 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 MMRN1Q13201 1228 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 DPYSL3Q14195 570 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 LEXMQ3ZCV2 418 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 PPP6R3Q5H9R7 873 aaPredicted RBP22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 ZFYVE27Q5T4F4 411 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 MFSD7Q6UXD7 560 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 BBS7Q8IWZ6 715 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 ZNF683Q8IZ20 524 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 CELF5Q8N6W0 485 aaKnown RBP22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 EXD1Q8NHP7 514 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 P2RY11Q96G91 374 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 DDX56Q9NY93 547 aaKnown RBP22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 SLC12A6Q9UHW9 1150 aa22.56■■□□□ 1.2
PDLIM3-203ENST00000284771 LRRD1A4D1F6 860 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 KRT1P04264 644 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 AUHQ13825 339 aaKnown RBP22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 RAP1GAP2Q684P5 730 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 RFWD3Q6PCD5 774 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 COG1Q8WTW3 980 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 TSC1Q92574 1164 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 ZNF592Q92610 1267 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 FGF14Q92915 247 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 OSBPL9Q96SU4 736 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 HERPUD2Q9BSE4 406 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 CWC15Q9P013 229 aaKnown RBP22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 NEU3Q9UQ49 428 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 SH3BP1Q9Y3L3 701 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 E2F8A0AVK6 867 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 KIF2AO00139 706 aaPredicted RBP22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 CREB3O43889 395 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 LRIG2O94898 1065 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 TUBB4AP04350 444 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 GOT1P17174 413 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 SLC11A2P49281 568 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 ADGRF1Q5T601 910 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 MANEALQ5VSG8 457 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 FBXL22Q6P050 247 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 PARM1Q6UWI2 310 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 DDX42Q86XP3 938 aaKnown RBP eCLIP22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 RCOR2Q8IZ40 523 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 RPP25Q9BUL9 199 aaKnown RBP22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 PLA2G2FQ9BZM2 168 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 DCLK3Q9C098 648 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 CARD9Q9H257 536 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 LINC00597Q9H2U6 94 aa22.55■■□□□ 1.2
PDLIM3-203ENST00000284771 TRDMT1O14717 391 aaKnown RBP22.54■■□□□ 1.2
PDLIM3-203ENST00000284771 ZNF185O15231 689 aa22.54■■□□□ 1.2
PDLIM3-203ENST00000284771 CDKN2BP42772 138 aa22.54■■□□□ 1.2
PDLIM3-203ENST00000284771 IRAK1P51617 712 aa22.54■■□□□ 1.2
PDLIM3-203ENST00000284771 ADCY2Q08462 1091 aa22.54■■□□□ 1.2
PDLIM3-203ENST00000284771 PDK2Q15119 407 aa22.54■■□□□ 1.2
PDLIM3-203ENST00000284771 SMAD2Q15796 467 aaKnown RBP22.54■■□□□ 1.2
PDLIM3-203ENST00000284771 TAZQ16635 292 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms