RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 STK39Q9UEW8 545 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 TLR6Q9Y2C9 796 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 DENND4CQ5VZ89 1909 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 ZBBXA8MT70 800 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 GOLGA8KD6RF30 607 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 ZNF189O75820 626 aaPredicted RBP20.13■□□□□ 0.81
C11orf49-201ENST00000278460 GJB5O95377 273 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 MAP3K6O95382 1288 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 NUDT17P0C025 328 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 ZDHHC11BP0C7U3 371 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 ACTN2P35609 894 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 EIF3BP55884 814 aaKnown RBP20.13■□□□□ 0.81
C11orf49-201ENST00000278460 DENND2CQ68D51 928 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 B4GALNT4Q76KP1 1039 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 GIPC2Q8TF65 315 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 CPT1BQ92523 772 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 PRCCQ92733 491 aaPredicted RBP20.13■□□□□ 0.81
C11orf49-201ENST00000278460 ZBTB9Q96C00 473 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 SLC39A13Q96H72 371 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 PKNOX2Q96KN3 472 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 SEMA4AQ9H3S1 761 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 NUDT5Q9UKK9 219 aa20.13■□□□□ 0.81
C11orf49-201ENST00000278460 MTCL1Q9Y4B5 1905 aaKnown RBP20.12■□□□□ 0.81
C11orf49-201ENST00000278460 KCNU1A8MYU2 1149 aa20.12■□□□□ 0.81
C11orf49-201ENST00000278460 MSI1O43347 362 aaKnown RBP20.12■□□□□ 0.81
C11orf49-201ENST00000278460 LRIG2O94898 1065 aa20.12■□□□□ 0.81
C11orf49-201ENST00000278460 SLC2A3P11169 496 aa20.12■□□□□ 0.81
C11orf49-201ENST00000278460 RAB33AQ14088 237 aa20.12■□□□□ 0.81
C11orf49-201ENST00000278460 NAT8LQ8N9F0 302 aa20.12■□□□□ 0.81
C11orf49-201ENST00000278460 TFB1MQ8WVM0 346 aaKnown RBP20.12■□□□□ 0.81
C11orf49-201ENST00000278460 BADQ92934 168 aa20.12■□□□□ 0.81
C11orf49-201ENST00000278460 UBE2OQ9C0C9 1292 aaKnown RBP20.12■□□□□ 0.81
C11orf49-201ENST00000278460 PHACTR1Q9C0D0 580 aa20.12■□□□□ 0.81
C11orf49-201ENST00000278460 CDC42EP4Q9H3Q1 356 aaKnown RBP20.12■□□□□ 0.81
C11orf49-201ENST00000278460 PCDHB12Q9Y5F1 795 aa20.12■□□□□ 0.81
C11orf49-201ENST00000278460 RIPK2O43353 540 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 RNF40O75150 1001 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 PAGE1O75459 146 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 SEC24AO95486 1093 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 NRG1Q02297 640 aaPredicted RBP20.11■□□□□ 0.81
C11orf49-201ENST00000278460 PDK1Q15118 436 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 RASIP1Q5U651 963 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 HEATR6Q6AI08 1181 aaKnown RBP20.11■□□□□ 0.81
C11orf49-201ENST00000278460 VPS52Q8N1B4 723 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 ZNF276Q8N554 614 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 OVCA2Q8WZ82 227 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 PRDM10Q9NQV6 1147 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 PCDH10Q9P2E7 1040 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 SNX10Q9Y5X0 201 aa20.11■□□□□ 0.81
C11orf49-201ENST00000278460 C5orf60A6NFR6 353 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 PPP1R12AO14974 1030 aaPredicted RBP20.1■□□□□ 0.81
C11orf49-201ENST00000278460 GCATO75600 419 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 HOXC13P31276 330 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 TBX4P57082 545 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 ZNF844Q08AG5 666 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 PRKD1Q15139 912 aaPredicted RBP20.1■□□□□ 0.81
C11orf49-201ENST00000278460 CEP85LQ5SZL2 805 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 MANEALQ5VSG8 457 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 PSRC1Q6PGN9 363 aaPredicted RBP20.1■□□□□ 0.81
C11orf49-201ENST00000278460 FIBCD1Q8N539 461 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 PDZD8Q8NEN9 1154 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 FCRL2Q96LA5 508 aaPredicted RBP20.1■□□□□ 0.81
C11orf49-201ENST00000278460 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.1■□□□□ 0.81
C11orf49-201ENST00000278460 FNIP2Q9P278 1114 aa20.1■□□□□ 0.81
C11orf49-201ENST00000278460 NCAM2O15394 837 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 LINC00271P0C7V0 271 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 EPHB2P29323 1055 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 SERPINB6P35237 376 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 NRLP54845 237 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 CREMQ03060 361 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 SLC29A2Q14542 456 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 TRIP4Q15650 581 aaPredicted RBP20.09■□□□□ 0.81
C11orf49-201ENST00000278460 TMEM240Q5SV17 173 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 OR2W6PQ8NHA6 318 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 HTR3CQ8WXA8 447 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 C1orf74Q96LT6 269 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 PWWP2AQ96N64 755 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 RBM15Q96T37 977 aaKnown RBP eCLIP20.09■□□□□ 0.81
C11orf49-201ENST00000278460 FERMT1Q9BQL6 677 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 MRPL17Q9NRX2 175 aaKnown RBP20.09■□□□□ 0.81
C11orf49-201ENST00000278460 MAFFQ9ULX9 164 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 NEU3Q9UQ49 428 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 INSL6Q9Y581 213 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 NYNRINQ9P2P1 1898 aaKnown RBP20.09■□□□□ 0.81
C11orf49-201ENST00000278460 TTC4O95801 387 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 CSH1P0DML2 217 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 CSH2P0DML3 217 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 BASP1P80723 227 aaKnown RBP20.09■□□□□ 0.81
C11orf49-201ENST00000278460 EFEMP1Q12805 493 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 SNX30Q5VWJ9 437 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 ANKRD22Q5VYY1 191 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 CLP1Q92989 425 aaKnown RBP20.09■□□□□ 0.81
C11orf49-201ENST00000278460 CDK5RAP1Q96SZ6 601 aaKnown RBP20.09■□□□□ 0.81
C11orf49-201ENST00000278460 BRD8Q9H0E9 1235 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 SIK2Q9H0K1 926 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 TMBIM4Q9HC24 238 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 MARCH2Q9P0N8 246 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 SSX2IPQ9Y2D8 614 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 YIPF1Q9Y548 306 aa20.09■□□□□ 0.81
C11orf49-201ENST00000278460 POLR3GO15318 223 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms