RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MAP3K21Q5TCX8 1036 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 TMEM198Q66K66 360 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 PPP1R2P3Q6NXS1 205 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 B3GNT6Q6ZMB0 384 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ZNF534Q76KX8 674 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 SCUBE3Q8IX30 993 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 RTKN2Q8IZC4 609 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 FAM49BQ9NUQ9 324 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ARHGAP26Q9UNA1 814 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 SSX2IPQ9Y2D8 614 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ADGRA2Q96PE1 1338 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
COL8A1-202ENST00000273342 USP12O75317 370 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 CSPG5O95196 566 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 GPD1P21695 349 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 RPL10P27635 214 aaKnown RBP13.28□□□□□ -0.28
COL8A1-202ENST00000273342 NAMPTP43490 491 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 THOP1P52888 689 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 CDKL1Q00532 357 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 SNAPC2Q13487 334 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 FLOT2Q14254 428 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 GRM2Q14416 872 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 KBTBD6Q86V97 674 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 WDR49Q8IV35 697 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 SPNS2Q8IVW8 549 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 PLD6Q8N2A8 252 aaKnown RBP13.28□□□□□ -0.28
COL8A1-202ENST00000273342 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 B3GNT5Q9BYG0 378 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 ELOVL4Q9GZR5 314 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 XYLT2Q9H1B5 865 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 TXNDC16Q9P2K2 825 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 GNEQ9Y223 722 aaKnown RBP13.28□□□□□ -0.28
COL8A1-202ENST00000273342 HES2Q9Y543 173 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 DOCK5Q9H7D0 1870 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 SMIM31A0A1B0GVY4 71 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 H0YCG3 227 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 GOLGA8TH3BQL2 631 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 TSHRP16473 764 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 MGAT1P26572 445 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 RGS2P41220 211 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 GABRB2P47870 512 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 MYBPC1Q00872 1141 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 SLC10A2Q12908 348 aaPredicted RBP13.28□□□□□ -0.28
COL8A1-202ENST00000273342 ZNF667Q5HYK9 610 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 CYP4V2Q6ZWL3 525 aaPredicted RBP13.28□□□□□ -0.28
COL8A1-202ENST00000273342 ATP2A3Q93084 1043 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 TMIGD2Q96BF3 282 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 HSPBAP1Q96EW2 488 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 NLRP4Q96MN2 994 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 PNPLA8Q9NP80 782 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 PCDHGC3Q9UN70 934 aa13.28□□□□□ -0.28
COL8A1-202ENST00000273342 SYNJ2BP-COX16A0A087WUM0 186 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 FAM159BA6NKW6 160 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 INO80B-WBP1J3KQ70 363 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.28
COL8A1-202ENST00000273342 BIRC5O15392 142 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 FOXD2O60548 495 aaPredicted RBP13.27□□□□□ -0.28
COL8A1-202ENST00000273342 TMCC1O94876 653 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 OATP04181 439 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 SERPINE1P05121 402 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 HNRNPCP07910 306 aaKnown RBP eCLIP13.27□□□□□ -0.28
COL8A1-202ENST00000273342 KLF10Q13118 480 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 TAZQ16635 292 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 FAM183BPQ6ZVS7 135 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 TRIM50Q86XT4 487 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 BHLHE22Q8NFJ8 381 aaPredicted RBP13.27□□□□□ -0.28
COL8A1-202ENST00000273342 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 AGAP3Q96P47 875 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 INO80BQ9C086 356 aaPredicted RBP13.27□□□□□ -0.28
COL8A1-202ENST00000273342 RNF19AQ9NV58 838 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 COX16Q9P0S2 106 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 ITGA11Q9UKX5 1188 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 TMCO1Q9UM00 188 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 FIS1Q9Y3D6 152 aa13.27□□□□□ -0.28
COL8A1-202ENST00000273342 ITGB3P05106 788 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 CHRNGP07510 517 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 SUPT20HL2P0C7V6 817 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 L1CAMP32004 1257 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 HDAC4P56524 1084 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 ABCE1P61221 599 aaKnown RBP13.27□□□□□ -0.29
COL8A1-202ENST00000273342 HPCAP84074 193 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 MS4A2Q01362 244 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 PTPN11Q06124 597 aaPredicted RBP13.27□□□□□ -0.29
COL8A1-202ENST00000273342 SUPT20HL1Q3ZLR7 823 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 KCNT2Q6UVM3 1135 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 PACS1Q6VY07 963 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 ARCQ7LC44 396 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 ADGRG6Q86SQ4 1221 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 ZBTB46Q86UZ6 589 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 SLC4A11Q8NBS3 891 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 TMA16Q96EY4 203 aaKnown RBP13.27□□□□□ -0.29
COL8A1-202ENST00000273342 LGMNQ99538 433 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 LPIN3Q9BQK8 851 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 SNRNP25Q9BV90 132 aaKnown RBP13.27□□□□□ -0.29
COL8A1-202ENST00000273342 NRDE2Q9H7Z3 1164 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 ANLNQ9NQW6 1124 aa13.27□□□□□ -0.29
COL8A1-202ENST00000273342 A0A0J9YVX5 310 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 TNNC2P02585 160 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms