RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 TRPV1Q8NER1 839 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 RNF139Q8WU17 664 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 ULBP1Q9BZM6 244 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 LAMA3Q16787 3333 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 HMX2A2RU54 273 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 UNCXA6NJT0 531 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 XPOTO43592 962 aaKnown RBP20.8■□□□□ 0.92
RAB5A-201ENST00000273047 NEK3P51956 506 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 STRADAQ7RTN6 431 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.8■□□□□ 0.92
RAB5A-201ENST00000273047 COLGALT1Q8NBJ5 622 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 DEPDC1BQ8WUY9 529 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 EDEM1Q92611 657 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 P2RY11Q96G91 374 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 APOPT1Q96IL0 206 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 SRPK1Q96SB4 655 aaKnown RBP20.8■□□□□ 0.92
RAB5A-201ENST00000273047 USH1CQ9Y6N9 552 aa20.8■□□□□ 0.92
RAB5A-201ENST00000273047 CCDC195A0A1B0GUA6 201 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 WARSP23381 471 aaKnown RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 CALRP27797 417 aaKnown RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 GMPRP36959 345 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 IRX4P78413 519 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 MTDHQ86UE4 582 aaKnown RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 PRR11Q96HE9 360 aaPredicted RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 PCED1BQ96HM7 432 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 OLFM3Q96PB7 478 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 SSU72Q9NP77 194 aaKnown RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 CYLDQ9NQC7 956 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 RNF103O00237 685 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 TM9SF1O15321 606 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 DGKIO75912 1065 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 SCNN1GP51170 649 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 FKBP1BP68106 108 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 DEUP1Q05D60 604 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 TAF1BQ53T94 588 aaPredicted RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 TTC39BQ5VTQ0 682 aaPredicted RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 CES4AQ5XG92 561 aa20.79■□□□□ 0.92
RAB5A-201ENST00000273047 GDF6Q6KF10 455 aaPredicted RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 EBNA1BP2Q99848 306 aaKnown RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 CORO1CQ9ULV4 474 aaPredicted RBP20.79■□□□□ 0.92
RAB5A-201ENST00000273047 CAPN9O14815 690 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 USP12O75317 370 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 UNC5CO95185 931 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 PSMB4P28070 264 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 PEX19P40855 299 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 MAGEA3P43357 314 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 PCBP1Q15365 356 aaKnown RBP eCLIP20.78■□□□□ 0.92
RAB5A-201ENST00000273047 TOP6BLQ8N6T0 577 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 AGAP3Q96P47 875 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 NPY6RQ99463 290 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 SMOQ99835 787 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 PRDM12Q9H4Q4 367 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 PCMTD2Q9NV79 361 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 TTC3P53804 2025 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 COPEO14579 308 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 RFPL1O75677 317 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 AP1G2O75843 785 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 NR2C2P49116 596 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 SLC18A2Q05940 514 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 BLMHQ13867 455 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 SETDB1Q15047 1291 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 NBPF20Q3BBV1 942 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 NLRP9Q7RTR0 991 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 ZMIZ2Q8NF64 920 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 OXNAD1Q96HP4 312 aaPredicted RBP20.78■□□□□ 0.92
RAB5A-201ENST00000273047 FAM105AQ9NUU6 356 aa20.78■□□□□ 0.92
RAB5A-201ENST00000273047 E2F8A0AVK6 867 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 EME2A4GXA9 379 aaPredicted RBP20.77■□□□□ 0.92
RAB5A-201ENST00000273047 CHRNA1P02708 482 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 FAM200BP0CF97 657 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 T-ENOLP0DO92 83 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 PRKCHP24723 683 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 ABL2P42684 1182 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 MAGEA6P43360 314 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 CCNG1P51959 295 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 UTP4Q969X6 686 aaKnown RBP20.77■□□□□ 0.92
RAB5A-201ENST00000273047 PLCD4Q9BRC7 762 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 TSSK1BQ9BXA7 367 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 AGO3Q9H9G7 860 aaKnown RBP20.77■□□□□ 0.92
RAB5A-201ENST00000273047 PNPLA8Q9NP80 782 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 SHROOM3Q8TF72 1996 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 MKI67P46013 3256 aaKnown RBP20.77■□□□□ 0.92
RAB5A-201ENST00000273047 GABRDO14764 452 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 TNPO2O14787 897 aaKnown RBP20.77■□□□□ 0.92
RAB5A-201ENST00000273047 NCAM1P13591 858 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 TSHRP16473 764 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 ZFXP17010 805 aaPredicted RBP20.77■□□□□ 0.92
RAB5A-201ENST00000273047 MGAT1P26572 445 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 NOS2P35228 1153 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 ALKBH8Q96BT7 664 aaKnown RBP20.77■□□□□ 0.92
RAB5A-201ENST00000273047 ARHGAP39Q9C0H5 1083 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 VPS11Q9H270 941 aa20.77■□□□□ 0.92
RAB5A-201ENST00000273047 FBXO6Q9NRD1 293 aaPredicted RBP20.77■□□□□ 0.92
RAB5A-201ENST00000273047 A0A0A0MRY4 1105 aa20.76■□□□□ 0.91
RAB5A-201ENST00000273047 F8W810 466 aa20.76■□□□□ 0.91
RAB5A-201ENST00000273047 LIN7AO14910 233 aaPredicted RBP20.76■□□□□ 0.91
RAB5A-201ENST00000273047 DAB1O75553 588 aa20.76■□□□□ 0.91
RAB5A-201ENST00000273047 POMCP01189 267 aa20.76■□□□□ 0.91
RAB5A-201ENST00000273047 SNRPAP09012 282 aaKnown RBP20.76■□□□□ 0.91
RAB5A-201ENST00000273047 LRPAP1P30533 357 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms