RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 LRIG2O94898 1065 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 SOD2P04179 222 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 VAV1P15498 845 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 MAGEA4P43358 317 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 ZNF135P52742 658 aaPredicted RBP11.94□□□□□ -0.5
SCAF11-201ENST00000266589 RPL10AP62906 217 aaKnown RBP11.94□□□□□ -0.5
SCAF11-201ENST00000266589 HIF1AQ16665 826 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 MSANTD2Q6P1R3 559 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 CENPUQ71F23 418 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 CMTR2Q8IYT2 770 aaKnown RBP11.94□□□□□ -0.5
SCAF11-201ENST00000266589 FAM76AQ8TAV0 307 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 CCDC110Q8TBZ0 833 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 TMEM169Q96HH4 297 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 LGMNQ99538 433 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 OSBPL2Q9H1P3 480 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 RAB6BQ9NRW1 208 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 MRPL42Q9Y6G3 142 aaKnown RBP11.94□□□□□ -0.5
SCAF11-201ENST00000266589 HMGB1P1B2RPK0 211 aaPredicted RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 SMAPO00193 183 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 PPP1R12AO14974 1030 aaPredicted RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 BAIAP3O94812 1187 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 LAG3P18627 525 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 ATF6P18850 670 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 EPHB2P29323 1055 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 TAF10Q12962 218 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 KCNJ11Q14654 390 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 PPP2R5DQ14738 602 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 PDK1Q15118 436 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 OTOP2Q7RTS6 562 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 COLGALT1Q8NBJ5 622 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 GIPC2Q8TF65 315 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 HTR3CQ8WXA8 447 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 SIK2Q9H0K1 926 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 TLR8Q9NR97 1041 aaKnown RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 BCCIPQ9P287 314 aaKnown RBP eCLIP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 XPO7Q9UIA9 1087 aaKnown RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 SMIM23A6NLE4 172 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 CHADO15335 359 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 PAGE1O75459 146 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 GCATO75600 419 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 HSPA1AP0DMV8 641 aaKnown RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 HSPA1BP0DMV9 641 aaKnown RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 GLUD2P49448 558 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 ARL4CP56559 192 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 AP1B1Q10567 949 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 PDIA2Q13087 525 aaKnown RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 FASTKD3Q14CZ7 662 aaKnown RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 PRKD1Q15139 912 aaPredicted RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 TERF2Q15554 542 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 HP1BP3Q5SSJ5 553 aaPredicted RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 SYCP2LQ5T4T6 812 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 FAXCQ5TGI0 409 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 PDZD4Q76G19 769 aaPredicted RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 TP53INP2Q8IXH6 220 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 ZBED8Q8IZ13 594 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 NPWQ8N729 165 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 CCNYQ8ND76 341 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 EPS8L3Q8TE67 593 aaKnown RBP11.93□□□□□ -0.5
SCAF11-201ENST00000266589 HAPLN3Q96S86 360 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 YME1L1Q96TA2 773 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 CLSTN3Q9BQT9 956 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 HERC2P3Q9BVR0 1158 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 KLC2Q9H0B6 622 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 PRDM12Q9H4Q4 367 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 TLR6Q9Y2C9 796 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 NR2E3Q9Y5X4 410 aa11.93□□□□□ -0.5
SCAF11-201ENST00000266589 TLDC2A0PJX2 215 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 C5orf60A6NFR6 353 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 SLC38A8A6NNN8 435 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 BANF1O75531 89 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 MOCS2O96007 188 aaPredicted RBP11.92□□□□□ -0.5
SCAF11-201ENST00000266589 SRGAP2BP0DMP2 458 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 PSEN1P49768 467 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 DSG1Q02413 1049 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 EFEMP1Q12805 493 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 SKIDA1Q1XH10 827 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 DNAJC21Q5F1R6 531 aaKnown RBP11.92□□□□□ -0.5
SCAF11-201ENST00000266589 AGBL2Q5U5Z8 902 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 RASIP1Q5U651 963 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 RWDD4Q6NW29 188 aaKnown RBP11.92□□□□□ -0.5
SCAF11-201ENST00000266589 C4orf22Q6V702 233 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 TMEM109Q9BVC6 243 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 PHACTR1Q9C0D0 580 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 IL23AQ9NPF7 189 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCAF11-201ENST00000266589 COMMD8Q9NX08 183 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 CLIC5Q9NZA1 410 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 SPG21Q9NZD8 308 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 MAGED2Q9UNF1 606 aaPredicted RBP11.92□□□□□ -0.5
SCAF11-201ENST00000266589 RAD54BQ9Y620 910 aa11.92□□□□□ -0.5
SCAF11-201ENST00000266589 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 KCNU1A8MYU2 1149 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 RASGRF2O14827 1237 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 SERPINB6P35237 376 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 SLCO1A2P46721 670 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 TUFMP49411 452 aaKnown RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 TBX4P57082 545 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 FNBP1LQ5T0N5 605 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ARHGEF18Q6ZSZ5 1173 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 CCDC13Q8IYE1 715 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms