RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 CXorf21Q9HAI6 301 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 REXO2Q9Y3B8 237 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 PABPC4LP0CB38 370 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 ATF4P18848 351 aaPredicted RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 CCNFP41002 786 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 FASTKQ14296 549 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 RRM2BQ7LG56 351 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 TDRPQ86YL5 185 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 KBTBD2Q8IY47 623 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 KIAA0895Q8NCT3 520 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 ZNF420Q8TAQ5 688 aaPredicted RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 NSUN4Q96CB9 384 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 PDCD10Q9BUL8 212 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 FAIMQ9NVQ4 179 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 PRKAG3Q9UGI9 489 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 EIF3LQ9Y262 564 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 CCDC154A6NI56 674 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 H6PDO95479 791 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 ASS1P00966 412 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 SLC5A3P53794 718 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 ATN1P54259 1190 aaPredicted RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 TPTEP56180 551 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 SNAP25P60880 206 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 OSTNP61366 133 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 COPZ1P61923 177 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 SLC25A3Q00325 362 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 PUDPQ08623 228 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 MTM1Q13496 603 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 NAPEPLDQ6IQ20 393 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 SPOCD1Q6ZMY3 1216 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 NOP9Q86U38 636 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 ALDH16A1Q8IZ83 802 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 MCFD2Q8NI22 146 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 TINF2Q9BSI4 451 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 LRRC40Q9H9A6 602 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 SPAG4Q9NPE6 437 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 IGSF9Q9P2J2 1179 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 TRAFD1O14545 582 aaPredicted RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 WARSP23381 471 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 CCT8P50990 548 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 MTMR1Q13613 665 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 SNRNP35Q16560 246 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 NRF1Q16656 503 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 METTL21CQ5VZV1 264 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 UCMAQ8WVF2 138 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 MCEEQ96PE7 176 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 CADM1Q9BY67 442 aaKnown RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 RBAKQ9NYW8 714 aaPredicted RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 H2AFY2Q9P0M6 372 aaPredicted RBP10.95□□□□□ -0.66
CPT1A-201ENST00000265641 ADAM28Q9UKQ2 775 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
CPT1A-201ENST00000265641 MAGEB16A2A368 324 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 M0QYV0 167 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 SLC22A2O15244 555 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ANXA6P08133 673 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 GPD2P43304 727 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 RPL10AP62906 217 aaKnown RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 N4BP2L1Q5TBK1 243 aaPredicted RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 DENND1BQ6P3S1 775 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 NSMCE3Q96MG7 304 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 CITED4Q96RK1 184 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 HDHD2Q9H0R4 259 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 DHX35Q9H5Z1 703 aaKnown RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 PCDH12Q9NPG4 1184 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 PEX16Q9Y5Y5 336 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 CEMIPQ8WUJ3 1361 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ILVBLA1L0T0 632 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 SH3PXD2BA1X283 911 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 FAM172BPA6NC97 362 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 HUS1O60921 280 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 YES1P07947 543 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ACTR3P61158 418 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 SULT2A1Q06520 285 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 NSUN2Q08J23 767 aaKnown RBP eCLIP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 TAF5Q15542 800 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 CYP51A1Q16850 503 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 DOK7Q18PE1 504 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 POU5F2Q8N7G0 328 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 FAM71DQ8N9W8 422 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 PIGBQ92521 554 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 TRIM54Q9BYV2 358 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 MKLN1Q9UL63 735 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ITM2BQ9Y287 266 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ZSCAN9O15535 394 aaPredicted RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 DCXO43602 365 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ACLYP53396 1101 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 TRIM32Q13049 653 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ARHGEF6Q15052 776 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 GLRA4Q5JXX5 417 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 EIF3MQ7L2H7 374 aaKnown RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 PACRGLQ8N7B6 248 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 VPS37AQ8NEZ2 397 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ACTRT2Q8TDY3 377 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ASZ1Q8WWH4 475 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 HIPK3Q9H422 1215 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 SP140LQ9H930 580 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 AS3MTQ9HBK9 375 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 CPSF3Q9UKF6 684 aaKnown RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 AGO2Q9UKV8 859 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms