RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 L1CAMP32004 1257 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 PPP2R2AP63151 447 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 PLD1Q13393 1074 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 SLC45A4Q5BKX6 768 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 IQCKQ8N0W5 287 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 GDAP1Q8TB36 358 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 AUTS2Q8WXX7 1259 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 FCRL2Q96LA5 508 aaPredicted RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 GRHL1Q9NZI5 618 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 FNDC3AQ9Y2H6 1198 aaKnown RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 DPYSL4O14531 572 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 TBX18O95935 607 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 MT-ND3P03897 115 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 CKMP06732 381 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 ETFBP38117 255 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 KLF1Q13351 362 aaPredicted RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 LRRC14Q15048 493 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 CNKSR3Q6P9H4 555 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 PAQR9Q6ZVX9 377 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 ANKS1BQ7Z6G8 1248 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 ZNF598Q86UK7 904 aaKnown RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 ARHGEF4Q9NR80 690 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 MPP6Q9NZW5 540 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 ARHGAP42A6NI28 874 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 GOLGA8RI6L899 631 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 PPFIA2O75334 1257 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 PCSK7Q16549 785 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 TRIM71Q2Q1W2 868 aaKnown RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 PKDCCQ504Y2 493 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 IL31Q6EBC2 164 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 TRNP1Q6NT89 227 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 NSRP1Q9H0G5 558 aaKnown RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 ETNK1Q9HBU6 452 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 SPG21Q9NZD8 308 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 NINJ2Q9NZG7 142 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 PMPCBO75439 489 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 PAGE1O75459 146 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 MBL2P11226 248 aaPredicted RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 KLRC2P26717 231 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 SCNN1AP37088 669 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 EPHB3P54753 998 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 DPYSL2Q16555 572 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 FIBCD1Q8N539 461 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 IPMKQ8NFU5 416 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 PDCD6IPQ8WUM4 868 aaKnown RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 TBC1D31Q96DN5 1066 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 FUBP3Q96I24 572 aaKnown RBP eCLIP9.6□□□□□ -0.87
SSR3-201ENST00000265044 NPY6RQ99463 290 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 HAUS2Q9NVX0 235 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 FZD10Q9ULW2 581 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 C3orf70A6NLC5 250 aaPredicted RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 M0QZQ0 153 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 MFSD11O43934 449 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 USP12O75317 370 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 SPAG7O75391 227 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 LRIG2O94898 1065 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 ATP5C1P36542 298 aaKnown RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 ELK3P41970 407 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 SLC11A2P49281 568 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 GLUD2P49448 558 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 SPARCL1Q14515 664 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 SIX1Q15475 284 aaPredicted RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 ZKSCAN8Q15776 578 aaPredicted RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 KLHL38Q2WGJ6 581 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 RTP2Q5QGT7 225 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 RAP1GAP2Q684P5 730 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 ZDHHC24Q6UX98 284 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 MREGQ8N565 214 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 ZCCHC9Q8N567 271 aaKnown RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 ZMIZ2Q8NF64 920 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 SLC35B2Q8TB61 432 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 IRGQQ8WZA9 623 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 CYTH2Q99418 400 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 ELAC1Q9H777 363 aaKnown RBP9.6□□□□□ -0.87
SSR3-201ENST00000265044 TMBIM4Q9HC24 238 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 ETNK2Q9NVF9 386 aa9.6□□□□□ -0.87
SSR3-201ENST00000265044 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.59□□□□□ -0.87
SSR3-201ENST00000265044 TCRBV5S1A1TA0A578 114 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 WDR91A4D1P6 747 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 F5H5T6 163 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 MTSS1O43312 755 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 FGBP02675 491 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 SYN1P17600 705 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 AARSP49588 968 aaKnown RBP eCLIP9.59□□□□□ -0.87
SSR3-201ENST00000265044 FAAP100Q0VG06 881 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 ZNF235Q14590 738 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 ZSCAN26Q16670 478 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 MDM1Q8TC05 714 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 KLF6Q99612 283 aaPredicted RBP9.59□□□□□ -0.87
SSR3-201ENST00000265044 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 OLA1Q9NTK5 396 aaKnown RBP9.59□□□□□ -0.87
SSR3-201ENST00000265044 FBXW11Q9UKB1 542 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 GOLGA6L7A0A1B0GV03 622 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 SMAPO00193 183 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 AVILO75366 819 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 ANKRD20A2Q5SQ80 823 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 ANKRD20A1Q5TYW2 823 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 ANKRD20A3Q5VUR7 823 aa9.59□□□□□ -0.87
SSR3-201ENST00000265044 C4orf33Q8N1A6 199 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms