RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CHN2P52757 468 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 HK2P52789 917 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 PDK3Q15120 406 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 ATP13A4Q4VNC1 1196 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 ERAP2Q6P179 960 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 BPIFB6Q8NFQ5 453 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 WDR60Q8WVS4 1066 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 RORBQ92753 470 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 NARS2Q96I59 477 aaKnown RBP12.34□□□□□ -0.43
SMG6-201ENST00000263073 CGRRF1Q99675 332 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 MECRQ9BV79 373 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 PCDHA3Q9Y5H8 950 aa12.34□□□□□ -0.43
SMG6-201ENST00000263073 OVOS2A0A0G2JMS6 1433 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 CYB561D2O14569 222 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 ADCY6O43306 1168 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 TNFRSF21O75509 655 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 VDRP11473 427 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 GZMAP12544 262 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 MAGP20916 626 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 TRAF3Q13114 568 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 TRIM28Q13263 835 aaKnown RBP12.33□□□□□ -0.43
SMG6-201ENST00000263073 ADGRF2Q8IZF7 708 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 MYO1HQ8N1T3 1032 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 RNFT2Q96EX2 444 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 TRPC4Q9UBN4 977 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 KLHL20Q9Y2M5 609 aa12.33□□□□□ -0.43
SMG6-201ENST00000263073 TP73O15350 636 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 CYP7B1O75881 506 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 HMGCRP04035 888 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 SRP54P61011 504 aaKnown RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 CNTN1Q12860 1018 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 NR1D2Q14995 579 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 SHROOM1Q2M3G4 852 aaPredicted RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 ATG14Q6ZNE5 492 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 SAMD7Q7Z3H4 446 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 TERB1Q8NA31 727 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 SERHL2Q9H4I8 314 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 SERHLQ9NQF3 203 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 ABCB10Q9NRK6 738 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 ZC3H13Q5T200 1668 aaKnown RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 RBL1P28749 1068 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 FSTL1Q12841 308 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 HIST2H2ACQ16777 129 aaPredicted RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 HIST2H2AA3Q6FI13 130 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 UGT3A1Q6NUS8 523 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 NOTUMQ6P988 496 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 ABRAQ8N0Z2 381 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 EID3Q8N140 333 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 PGBD3Q8N328 593 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 ZFRQ96KR1 1074 aaKnown RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 ABCG8Q9H221 673 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 MAP10Q9P2G4 905 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 REREQ9P2R6 1566 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 OGTO15294 1046 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 MICAL2O94851 1124 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 LDLRP01130 860 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 CCDC130P13994 396 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 SCNN1BP51168 640 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 AUHQ13825 339 aaKnown RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 SEC23AQ15436 765 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 ZNF470Q6ECI4 717 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 TBC1D19Q8N5T2 526 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 FRMD8Q9BZ67 464 aaPredicted RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 POLR1BQ9H9Y6 1135 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 NFKBIL1Q9UBC1 381 aaPredicted RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 MTSS1O43312 755 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 PCSK1P29120 753 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 WEE1P30291 646 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 LRPAP1P30533 357 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 GRIA3P42263 894 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 IL12RB1P42701 662 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 STRIP1Q5VSL9 837 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 OLFML1Q6UWY5 402 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 CCDC126Q96EE4 140 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 SEMA4BQ9NPR2 832 aaPredicted RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 XPNPEP3Q9NQH7 507 aa12.33□□□□□ -0.44
SMG6-201ENST00000263073 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.44
SMG6-201ENST00000263073 TULP4Q9NRJ4 1543 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 GAKO14976 1311 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 CASTOR2A6NHX0 329 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 CBX4O00257 560 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 ANPEPP15144 967 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 NPY2RP49146 381 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 ZNF177Q13360 481 aaPredicted RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 XRCC4Q13426 336 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 RNF19BQ6ZMZ0 732 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 WDR36Q8NI36 951 aaKnown RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 ENKURQ8TC29 256 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 PPP1R13LQ8WUF5 828 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 ZBTB45Q96K62 511 aaPredicted RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 DPY30Q9C005 99 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 WDR41Q9HAD4 459 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 FBXO6Q9NRD1 293 aaPredicted RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 ZNF624Q9P2J8 865 aaPredicted RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 KLHL3Q9UH77 587 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 RRN3P2A6NIE6 340 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 H3BN98 237 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms