RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ALS2CR12Q96Q35 445 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 ARID3AQ99856 593 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 XYLT2Q9H1B5 865 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 LINC00597Q9H2U6 94 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 TRPC7Q9HCX4 862 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 HECTD1Q9ULT8 2610 aa13.94□□□□□ -0.18
SGCA-201ENST00000262018 PTPRBP23467 1997 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 TCRBV21S2A2A0A5A6 115 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 PIRO00625 290 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 ITGB3P05106 788 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 TMEM253P0C7T8 217 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 HAPLN1P10915 354 aaPredicted RBP13.93□□□□□ -0.18
SGCA-201ENST00000262018 ODC1P11926 461 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 GZMAP12544 262 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 KRT5P13647 590 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 PNPLA4P41247 253 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 PDE6CP51160 858 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 GALCP54803 685 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 FMO1Q01740 532 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 CDR2Q01850 454 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 PLEKHG6Q3KR16 790 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 ZNF677Q86XU0 584 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 LURAP1LQ8IV03 231 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 LRRC52Q8N7C0 313 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 CXorf38Q8TB03 319 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 SENP8Q96LD8 212 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 ZNF560Q96MR9 790 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 CYP2S1Q96SQ9 504 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 PCDHB18PQ96TA0 734 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 NIF3L1Q9GZT8 377 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 ISCUQ9H1K1 167 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 SIX4Q9UIU6 781 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 CDC23Q9UJX2 597 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 CFAP46Q8IYW2 2715 aa13.93□□□□□ -0.18
SGCA-201ENST00000262018 ANKRD62A6NC57 917 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 PPEF2O14830 753 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 RTN2O75298 545 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 NFATC1O95644 943 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 ATP1A1P05023 1023 aaKnown RBP13.92□□□□□ -0.18
SGCA-201ENST00000262018 CKMP06732 381 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 MMEP08473 750 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 KRT19P08727 400 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 POLR2BP30876 1174 aaKnown RBP13.92□□□□□ -0.18
SGCA-201ENST00000262018 ATICP31939 592 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 ZNF132P52740 706 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 RBP5P82980 135 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 USP4Q13107 963 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 IFI16Q16666 785 aaKnown RBP13.92□□□□□ -0.18
SGCA-201ENST00000262018 ZNF699Q32M78 642 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 EOGTQ5NDL2 527 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 EMC10Q5UCC4 262 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 SLC36A4Q6YBV0 504 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 GLRX5Q86SX6 157 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 SFTPA1Q8IWL2 248 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 SETD7Q8WTS6 366 aaKnown RBP13.92□□□□□ -0.18
SGCA-201ENST00000262018 VRTNQ9H8Y1 702 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 ZDHHC4Q9NPG8 344 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 SEPT11Q9NVA2 429 aaKnown RBP13.92□□□□□ -0.18
SGCA-201ENST00000262018 ABI2Q9NYB9 513 aaPredicted RBP13.92□□□□□ -0.18
SGCA-201ENST00000262018 TAS2R14Q9NYV8 317 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 KIAA1522Q9P206 1035 aaPredicted RBP13.92□□□□□ -0.18
SGCA-201ENST00000262018 PCOLCE2Q9UKZ9 415 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 AGAP1Q9UPQ3 857 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 PCDHB4Q9Y5E5 795 aa13.92□□□□□ -0.18
SGCA-201ENST00000262018 GOLGA4Q13439 2230 aaKnown RBP13.92□□□□□ -0.18
SGCA-201ENST00000262018 DENND4CQ5VZ89 1909 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 BUB1O43683 1085 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 CBFA2T3O75081 653 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 STAU1O95793 577 aaKnown RBP13.91□□□□□ -0.18
SGCA-201ENST00000262018 USP17L7P0C7H9 530 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 ITPKBP27987 946 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 GPR15P49685 360 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 TAF6P49848 677 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 LILRA4P59901 499 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 MYO1EQ12965 1108 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 TCEAL1Q15170 157 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 SV2CQ496J9 727 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 TAF3Q5VWG9 929 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 DNAAF5Q86Y56 855 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 RGL4Q8IZJ4 473 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 PDCL2Q8N4E4 241 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 LSM14AQ8ND56 463 aaKnown RBP13.91□□□□□ -0.18
SGCA-201ENST00000262018 SPPL2BQ8TCT7 592 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 SH3RF2Q8TEC5 729 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 C2orf15Q8WU43 125 aaKnown RBP13.91□□□□□ -0.18
SGCA-201ENST00000262018 SLC22A12Q96S37 553 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 ACP6Q9NPH0 428 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 MYO18BQ8IUG5 2567 aa13.91□□□□□ -0.18
SGCA-201ENST00000262018 TRAV19A0A0A6YYK7 116 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 GOLGA8CPA6NN73 597 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 TMCO5BA8MYB1 307 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 ENC1O14682 589 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 CAPN9O14815 690 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 TADA3O75528 432 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 CSH1P0DML2 217 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 CSH2P0DML3 217 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 ASPAP45381 313 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 SLC6A11P48066 632 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms