RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 C17orf102A2RUQ5 167 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 RTL3Q8N8U3 475 aaKnown RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 PRKD2Q9BZL6 878 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 GANQ9H2C0 597 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 CHORDC1Q9UHD1 332 aaPredicted RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 SMNDC1O75940 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
SORL1-201ENST00000260197 CPA3P15088 417 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 CYP11B2P19099 503 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 TROAPQ12815 778 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 ZNF571Q7Z3V5 609 aaPredicted RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 KCNK4Q9NYG8 393 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 CAMTA2O94983 1202 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 SNUPNO95149 360 aaKnown RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 ATP1A4Q13733 1029 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 SF3B3Q15393 1217 aaKnown RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 SAMD3Q8N6K7 520 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 CYP4F12Q9HCS2 524 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 RGS18Q9NS28 235 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 IARS2Q9NSE4 1012 aaKnown RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 TMCO1Q9UM00 188 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 SFSWAPQ12872 951 aaKnown RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 ERAP2Q6P179 960 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 FBXO33Q7Z6M2 555 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 PIK3R5Q8WYR1 880 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 STARD8Q92502 1023 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 AP3M1Q9Y2T2 418 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 GUCA1AP43080 201 aaPredicted RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 PLD1Q13393 1074 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 ARMC3Q5W041 872 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 TRPM5Q9NZQ8 1165 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 UBQLN1Q9UMX0 589 aaKnown RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 CDK7P50613 346 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 SLC34A1Q06495 639 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 CDC16Q13042 620 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 FBXO25Q8TCJ0 367 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 MIEF2Q96C03 454 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 RPS6KB2Q9UBS0 482 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 L1RE1Q9UN81 338 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 DYRK1BQ9Y463 629 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 A0A087WXM4 84 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 FAM47E-STBD1D6RA91 191 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 CD3EAPO15446 510 aaKnown RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 GRB10Q13322 594 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 PHACTR4Q8IZ21 702 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 DCLK3Q9C098 648 aa11.92□□□□□ -0.5
SORL1-201ENST00000260197 BARX2Q9UMQ3 279 aaPredicted RBP11.92□□□□□ -0.5
SORL1-201ENST00000260197 RNASEH1O60930 286 aaKnown RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 VDRP11473 427 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 OXCT1P55809 520 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 NFIL3Q16649 462 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 MGAT5BQ3V5L5 792 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 KLHL12Q53G59 568 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 TBCELQ5QJ74 424 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 FAXCQ5TGI0 409 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 KLHL17Q6TDP4 642 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 SPOCD1Q6ZMY3 1216 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 ACOT1Q86TX2 421 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 CDH24Q86UP0 819 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 SEMA6BQ9H3T3 888 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 RAB21Q9UL25 225 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 TDRD15B5MCY1 1934 aaKnown RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 SPTBN2O15020 2390 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 CACNA1DQ01668 2161 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 A0A087X1B8 175 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 LHX1P48742 406 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 TOB1P50616 345 aaPredicted RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 DDX39BQ13838 428 aaKnown RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 USP39Q53GS9 565 aaKnown RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 GPAMQ9HCL2 828 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 AKAP3O75969 853 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 PROSCO94903 275 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 JAK1P23458 1154 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 TMEM237Q96Q45 408 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 CYLDQ9NQC7 956 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 ASS1P00966 412 aaKnown RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 KRT6AP02538 564 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 MTIF3Q9H2K0 278 aaKnown RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 MYOZ2Q9NPC6 264 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 ZNF70Q9UC06 446 aaPredicted RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 ANKRD31Q8N7Z5 1873 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 WDR27A2RRH5 827 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 FLT3P36888 993 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 TIMM50Q3ZCQ8 353 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 MFSD4BQ5TF39 518 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 PMF1Q6P1K2 205 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 SMARCD1Q96GM5 515 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 CCDC3Q9BQI4 270 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 UGT2B28Q9BY64 529 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 RNF181Q9P0P0 153 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 PTPRZ1P23471 2315 aaPredicted RBP11.91□□□□□ -0.5
SORL1-201ENST00000260197 LRG1P02750 347 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 CLTBP09497 229 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 LRPAP1P30533 357 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 GPC1P35052 558 aa11.91□□□□□ -0.5
SORL1-201ENST00000260197 NEDD8Q15843 81 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms