RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 ATG4AQ8WYN0 398 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CPT1BQ92523 772 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 POP5Q969H6 163 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 FAM111AQ96PZ2 611 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ZWILCHQ9H900 591 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 HMGXB4Q9UGU5 601 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 DMTF1Q9Y222 760 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ITM2BQ9Y287 266 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 MYO16Q9Y6X6 1858 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 KANSL1LA0AUZ9 987 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TESPA1A2RU30 521 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TRPC5OSA6NMA1 111 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 HACD1B0YJ81 288 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM114B3SHH9 223 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 I6L893 689 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM63AO94886 807 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CBX6O95503 412 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 HSPA1AP0DMV8 641 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 HSPA1BP0DMV9 641 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 NR2C2P49116 596 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 RAB27AP51159 221 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 VGLL4Q14135 290 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 FASTKD3Q14CZ7 662 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ATP13A4Q4VNC1 1196 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ITPRIPL1Q6GPH6 555 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 METTL7BQ6UX53 244 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 DRAXINQ8NBI3 349 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 MCUQ8NE86 351 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ADCY4Q8NFM4 1077 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SLC44A1Q8WWI5 657 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CPA5Q8WXQ8 436 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 IFT43Q96FT9 208 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PIWIL1Q96J94 861 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ADAMTS10Q9H324 1103 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 EPB41L1Q9H4G0 881 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PDZD7Q9H5P4 517 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PIM2Q9P1W9 311 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 IPO11Q9UI26 975 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PADI4Q9UM07 663 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TNFSF13BQ9Y275 285 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 TEX264Q9Y6I9 313 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ANAPC1Q9H1A4 1944 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 LTBP2Q14767 1821 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CCDC189A1A4V9 331 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 MBLAC1A4D2B0 266 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SPDYE5A6NIY4 337 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 GPC4O75487 556 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 MPOP05164 745 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 LYNP07948 512 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 FAM58BPP0C7Q3 252 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 NCF2P19878 526 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 IGFBP4P22692 258 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ATICP31939 592 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 NUMBP49757 651 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 HDAC4P56524 1084 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 STX5Q13190 355 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 SEMA3BQ13214 749 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 Q3C1V9 767 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 HSDL1Q3SXM5 330 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 CELF3Q5SZQ8 465 aaKnown RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ZDHHC17Q8IUH5 632 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 EGFL6Q8IUX8 553 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 ANKMY2Q8IV38 441 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 IGDCC3Q8IVU1 814 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 GPC2Q8N158 579 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 MS4A4AQ96JQ5 239 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 GBA2Q9HCG7 927 aaPredicted RBP4.27□□□□□ -1.73
UBE4A-201ENST00000252108 PKD2L1Q9P0L9 805 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 FBXO40Q9UH90 709 aa4.27□□□□□ -1.73
UBE4A-201ENST00000252108 COL1A2P08123 1366 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 RARBP10826 455 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 ADRA1DP25100 572 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 HOXA11P31270 313 aaPredicted RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF135P52742 658 aaPredicted RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 ACTR3P61158 418 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 OTUD4Q01804 1114 aaKnown RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 KDSRQ06136 332 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 IFRD2Q12894 506 aaPredicted RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 TEX44Q53QW1 395 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 MAP1SQ66K74 1059 aaPredicted RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 SNRNP48Q6IEG0 339 aaKnown RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 SWSAP1Q6NVH7 229 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 OLFML1Q6UWY5 402 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 MFSD7Q6UXD7 560 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 NDUFAF2Q8N183 169 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 RDH11Q8TC12 318 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 RAET1EQ8TD07 263 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 CCDC126Q96EE4 140 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 MCEEQ96PE7 176 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 SRPK1Q96SB4 655 aaKnown RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 ELOVL4Q9GZR5 314 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 RPF1Q9H9Y2 349 aaKnown RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 PIDD1Q9HB75 910 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 EML4Q9HC35 981 aaKnown RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 DNAJC28Q9NX36 388 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 BFARQ9NZS9 450 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 ANKRD6Q9Y2G4 727 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 TDRD15B5MCY1 1934 aaKnown RBP4.26□□□□□ -1.73
UBE4A-201ENST00000252108 DOCK3Q8IZD9 2030 aa4.26□□□□□ -1.73
UBE4A-201ENST00000252108 GOLGA8SH3BPF8 625 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms