RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 FDXACB1Q9BRP7 624 aaPredicted RBP17.36■□□□□ 0.37
SGPP1-201ENST00000247225 CDT1Q9H211 546 aa17.36■□□□□ 0.37
SGPP1-201ENST00000247225 MMADHCQ9H3L0 296 aaPredicted RBP17.36■□□□□ 0.37
SGPP1-201ENST00000247225 PLAC1Q9HBJ0 212 aa17.36■□□□□ 0.37
SGPP1-201ENST00000247225 HESX1Q9UBX0 185 aa17.36■□□□□ 0.37
SGPP1-201ENST00000247225 CPSF3Q9UKF6 684 aaKnown RBP17.36■□□□□ 0.37
SGPP1-201ENST00000247225 RAP1GDS1P52306 607 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 TMED1Q13445 227 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 CCDC142Q17RM4 750 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 C11orf91Q3C1V1 193 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 SLC9B1Q4ZJI4 515 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 HSP90AA5PQ58FG0 334 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 PPP1R2P3Q6NXS1 205 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 MPZL3Q6UWV2 235 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 SNX32Q86XE0 403 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 RNF135Q8IUD6 432 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 MICALL2Q8IY33 904 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 PLD6Q8N2A8 252 aaKnown RBP17.35■□□□□ 0.37
SGPP1-201ENST00000247225 STYXL1Q9Y6J8 313 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 ADGRA2Q96PE1 1338 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 IRF9Q00978 393 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 CCNIQ14094 377 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 PDK1Q15118 436 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 FAM47CQ5HY64 1035 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 FAM160B1Q5W0V3 765 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 RBM44Q6ZP01 1051 aaKnown RBP17.35■□□□□ 0.37
SGPP1-201ENST00000247225 GADL1Q6ZQY3 521 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 PNPLA1Q8N8W4 532 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 SEPT1Q8WYJ6 367 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 SPATA33Q96N06 139 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 CXCL16Q9H2A7 254 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 COG4Q9H9E3 785 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 ADA2Q9NZK5 511 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 SIRPGQ9P1W8 387 aa17.35■□□□□ 0.37
SGPP1-201ENST00000247225 TBC1D12O60347 775 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 ALDOAP04075 364 aaKnown RBP17.34■□□□□ 0.37
SGPP1-201ENST00000247225 CHRNGP07510 517 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 CYP3A5P20815 502 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 PSMB4P28070 264 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 GRIA2P42262 883 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 C6orf52Q5T4I8 152 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 FBXO16Q8IX29 292 aaPredicted RBP17.34■□□□□ 0.37
SGPP1-201ENST00000247225 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.34■□□□□ 0.37
SGPP1-201ENST00000247225 USP33Q8TEY7 942 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 SIGLEC10Q96LC7 697 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 OR52B2Q96RD2 323 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 NRDE2Q9H7Z3 1164 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 CNTN6Q9UQ52 1028 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 MAFBQ9Y5Q3 323 aaPredicted RBP17.34■□□□□ 0.37
SGPP1-201ENST00000247225 SDR42E2A6NKP2 422 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 PPEF2O14830 753 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 IQCF3P0C7M6 154 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 CPA3P15088 417 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 IL4RP24394 825 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 ARRB2P32121 409 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 NIPA2Q8N8Q9 360 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 NLRP7Q8WX94 980 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 SLC39A10Q9ULF5 831 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 SYNPO2Q9UMS6 1093 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 RPL26L1Q9UNX3 145 aaKnown RBP17.34■□□□□ 0.37
SGPP1-201ENST00000247225 C2CD4BA6NLJ0 364 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 PHGDHO43175 533 aaKnown RBP17.34■□□□□ 0.37
SGPP1-201ENST00000247225 DESP17661 470 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 BAG6P46379 1132 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 CDK7P50613 346 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 SLC5A9Q2M3M2 681 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 TEX44Q53QW1 395 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 OR52K1Q8NGK4 314 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 OMDQ99983 421 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 SYBUQ9NX95 663 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 KLHL8Q9P2G9 620 aaPredicted RBP17.34■□□□□ 0.37
SGPP1-201ENST00000247225 PCDHGC3Q9UN70 934 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 SSX2IPQ9Y2D8 614 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 NFASCO94856 1347 aa17.34■□□□□ 0.37
SGPP1-201ENST00000247225 SPAG6O75602 509 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 CCDC130P13994 396 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 SCNN1BP51168 640 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 EFNA5P52803 228 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 STILQ15468 1287 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 STRA8Q7Z7C7 330 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 FAM83AQ86UY5 434 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 CCDC185Q8N715 623 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 TFB1MQ8WVM0 346 aaKnown RBP17.33■□□□□ 0.37
SGPP1-201ENST00000247225 GMLQ99445 158 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 LIN28AQ9H9Z2 209 aaKnown RBP17.33■□□□□ 0.37
SGPP1-201ENST00000247225 AP4E1Q9UPM8 1137 aa17.33■□□□□ 0.37
SGPP1-201ENST00000247225 KLHL2O95198 593 aa17.33■□□□□ 0.36
SGPP1-201ENST00000247225 ITGA2BP08514 1039 aa17.33■□□□□ 0.36
SGPP1-201ENST00000247225 ARSAP15289 507 aa17.33■□□□□ 0.36
SGPP1-201ENST00000247225 CRHR1P34998 444 aa17.33■□□□□ 0.36
SGPP1-201ENST00000247225 PACS1Q6VY07 963 aa17.33■□□□□ 0.36
SGPP1-201ENST00000247225 TMEM174Q8WUU8 243 aa17.33■□□□□ 0.36
SGPP1-201ENST00000247225 TRAPPC9Q96Q05 1148 aa17.33■□□□□ 0.36
SGPP1-201ENST00000247225 FAM49AQ9H0Q0 323 aaPredicted RBP17.33■□□□□ 0.36
SGPP1-201ENST00000247225 HEMK1Q9Y5R4 338 aaPredicted RBP17.33■□□□□ 0.36
SGPP1-201ENST00000247225 SIPA1L1O43166 1804 aa17.33■□□□□ 0.36
SGPP1-201ENST00000247225 ZBTB14O43829 449 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 ATG7O95352 703 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 ARIH2O95376 493 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 MPSTP25325 297 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms