RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 FBXO21O94952 628 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 BCL10O95999 233 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 SHMT1P34896 483 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ALDH7A1P49419 539 aaKnown RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 CAMK2GQ13555 558 aaPredicted RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 FAM98BQ52LJ0 330 aaKnown RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 NDUFAF1Q9Y375 327 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 IQGAP1P46940 1657 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 F8VP50 259 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 GPR182O15218 404 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 CTXN3Q4LDR2 81 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 CHMP1BQ7LBR1 199 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 VN1R5Q7Z5H4 357 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ZCCHC9Q8N567 271 aaKnown RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 VPS33AQ96AX1 596 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 SH3GL1Q99961 368 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 GEMIN8Q9NWZ8 242 aaKnown RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 TUBGCP4Q9UGJ1 667 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ZMYM5Q9UJ78 669 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 SLC25A13Q9UJS0 675 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ITGA11Q9UKX5 1188 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 MROH7Q68CQ1 1323 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 MRASO14807 208 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 TRIM24O15164 1050 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 PSMG1O95456 288 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 MYBL2P10244 700 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ERVK-10P10266 1014 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 RBL1P28749 1068 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ITGB3BPQ13352 177 aaPredicted RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 NRF1Q16656 503 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 BHLHE22Q8NFJ8 381 aaPredicted RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 TRAPPC12Q8WVT3 735 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 RNF145Q96MT1 663 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 PDCD2LQ9BRP1 358 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ELOVL6Q9H5J4 265 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 LRCH1Q9Y2L9 728 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 RAD54BQ9Y620 910 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 KCNK1O00180 336 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 TRIM13O60858 407 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 THP07101 528 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ITGALP20701 1170 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DPYSL3Q14195 570 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 KCTD21Q4G0X4 260 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 FBXO47Q5MNV8 452 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 MFSD4BQ5TF39 518 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 ZNF470Q6ECI4 717 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DNAJC14Q6Y2X3 702 aaPredicted RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 KAT5Q92993 513 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DPY30Q9C005 99 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 RGS18Q9NS28 235 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 NMRK1Q9NWW6 199 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 MAP2P11137 1827 aaKnown RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 A0A1B0GW55 424 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 CNOT3O75175 753 aaKnown RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 FSBPO95073 299 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 VAPBO95292 243 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DUX4L2P0CJ85 424 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DUX4L3P0CJ86 424 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DUX4L4P0CJ87 422 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DUX4L5P0CJ88 424 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DUX4L6P0CJ89 424 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DUX4L7P0CJ90 424 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 MIPP30301 263 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 CASP5P51878 434 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 CRADDP78560 199 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 MRPS22P82650 360 aaKnown RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 CDH17Q12864 832 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 TYW3Q6IPR3 259 aaKnown RBP13.68□□□□□ -0.22
NEK4-201ENST00000233027 ANKRD13AQ8IZ07 590 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 TBL1YQ9BQ87 522 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 COLEC11Q9BWP8 271 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 GRIP2Q9C0E4 1043 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 XPNPEP3Q9NQH7 507 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 RAD18Q9NS91 495 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DUX4Q9UBX2 424 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 DYRK1BQ9Y463 629 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 FAM237BA0A1B0GVD1 139 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 FAM25AB3EWG3 89 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 FAM25CB3EWG5 89 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 FAM25GB3EWG6 89 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 RAB14P61106 215 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 ARMC6Q6NXE6 501 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 APBB2Q92870 758 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 MTFMTQ96DP5 389 aaKnown RBP13.67□□□□□ -0.22
NEK4-201ENST00000233027 KIAA1683Q9H0B3 1180 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 ACTR8Q9H981 624 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 RNF19AQ9NV58 838 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 PIK3C2BO00750 1634 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 ZMPSTE24O75844 475 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 MAPTP10636 758 aaKnown RBP13.67□□□□□ -0.22
NEK4-201ENST00000233027 ALADP13716 330 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 CNGA2Q16280 664 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
NEK4-201ENST00000233027 ETNPPLQ8TBG4 499 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms