RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 NOL11Q9H8H0 719 aaKnown RBP14.93□□□□□ -0.02
PRDM4-201ENST00000228437 RNF19AQ9NV58 838 aa14.93□□□□□ -0.02
PRDM4-201ENST00000228437 TMEM216Q9P0N5 145 aa14.93□□□□□ -0.02
PRDM4-201ENST00000228437 ATP8B3O60423 1300 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 ASTN2O75129 1339 aaPredicted RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 MPSTP25325 297 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 RPL10P27635 214 aaKnown RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 PIK3R1P27986 724 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 KLHL35Q6PF15 583 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 PHF13Q86YI8 300 aaPredicted RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 CDKL3Q8IVW4 592 aaPredicted RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 AFAP1L2Q8N4X5 818 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 C20orf27Q9GZN8 174 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 DRC3Q9H069 523 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 QTRT2Q9H974 415 aaKnown RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 RNF146Q9NTX7 359 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 KCNK1O00180 336 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 TIPRLO75663 272 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 HSPA8P11142 646 aaKnown RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 ADORA2BP29275 332 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 NUP107P57740 925 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 NME3Q13232 169 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 PITRM1Q5JRX3 1037 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 OTUD3Q5T2D3 398 aaPredicted RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 ANGEL2Q5VTE6 544 aaKnown RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 FAM160B2Q86V87 743 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 NCAPG2Q86XI2 1143 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 DSELQ8IZU8 1212 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 FAM163AQ96GL9 167 aaPredicted RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 VCPIP1Q96JH7 1222 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 BFARQ9NZS9 450 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 ZSCAN9O15535 394 aaPredicted RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 CCDC166P0CW27 439 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 SFSWAPQ12872 951 aaKnown RBP14.92□□□□□ -0.02
PRDM4-201ENST00000228437 DLG2Q15700 870 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 SLC9A4Q6AI14 798 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 NAT16Q8N8M0 369 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 SLC35B2Q8TB61 432 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 CASP10Q92851 521 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 POLR1BQ9H9Y6 1135 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 DCDC2Q9UHG0 476 aa14.92□□□□□ -0.02
PRDM4-201ENST00000228437 A0A096LPK6 155 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 OCA2Q04671 838 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 AMHR2Q16671 573 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 SLC9B1Q4ZJI4 515 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 CMPK2Q5EBM0 449 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 OR6B3Q8NGW1 331 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 TFAP2BQ92481 460 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 GMCL1Q96IK5 515 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 PKP2Q99959 881 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 RPF1Q9H9Y2 349 aaKnown RBP14.91□□□□□ -0.02
PRDM4-201ENST00000228437 FNDC3AQ9Y2H6 1198 aaKnown RBP14.91□□□□□ -0.02
PRDM4-201ENST00000228437 AP4S1Q9Y587 144 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 IGKV6D-41A0A0C4DH26 115 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 GRIN3BO60391 1043 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 MT-ND1P03886 318 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 NR3C2P08235 984 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 TSPAN8P19075 237 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 GRK2P25098 689 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 PCSK6P29122 969 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 SFNP31947 248 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 SIX6OS1Q8N1H7 587 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 LRTOMTQ8WZ04 291 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 LZICQ8WZA0 190 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 OR52B2Q96RD2 323 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 COQ10BQ9H8M1 238 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 GID8Q9NWU2 228 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 LAMB4A4D0S4 1761 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 TIAM2Q8IVF5 1701 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 ATP6AP2A0A1C7CYW4 349 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 C9JVG2 144 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 ATP6AP2O75787 350 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 CCDC130P13994 396 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 SLC18A1P54219 525 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 FUT11Q495W5 492 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 KCNT2Q6UVM3 1135 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 CDAN1Q8IWY9 1227 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 PLGRKTQ9HBL7 147 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 JPH1Q9HDC5 661 aaPredicted RBP14.91□□□□□ -0.02
PRDM4-201ENST00000228437 FAM198AQ9UFP1 575 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 DAPK2Q9UIK4 370 aa14.91□□□□□ -0.02
PRDM4-201ENST00000228437 GARTP22102 1010 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 HMOX2P30519 316 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 CCR10P46092 362 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 MSLNQ13421 630 aaPredicted RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 BFSP2Q13515 415 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 FAM47CQ5HY64 1035 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 KIAA2013Q8IYS2 634 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 OLIG1Q8TAK6 271 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 PBXIP1Q96AQ6 731 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 ZMAT2Q96NC0 199 aaKnown RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 OXCT2Q9BYC2 517 aaPredicted RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 TMEM39BQ9GZU3 492 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 USP29Q9HBJ7 922 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 DNAJA2O60884 412 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 OATP04181 439 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 S100BP04271 92 aaPredicted RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 CDK4P11802 303 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 CCND2P30279 289 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 FAM131BQ86XD5 332 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms