RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 STYK1Q6J9G0 422 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 METTL7BQ6UX53 244 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 TFAP2DQ7Z6R9 452 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 APOBEC3FQ8IUX4 373 aaKnown RBP14.09□□□□□ -0.15
NFKB1-201ENST00000226574 SNX31Q8N9S9 440 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 TMEM109Q9BVC6 243 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 PKD2L2Q9NZM6 624 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 GON4LQ3T8J9 2241 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 SP100P23497 879 aaPredicted RBP14.09□□□□□ -0.15
NFKB1-201ENST00000226574 LBRQ14739 615 aaKnown RBP14.09□□□□□ -0.15
NFKB1-201ENST00000226574 GALNTL6Q49A17 601 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 MIER2Q8N344 545 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 GIPC2Q8TF65 315 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 ECSITQ9BQ95 431 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 FICDQ9BVA6 458 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 EML4Q9HC35 981 aaKnown RBP14.09□□□□□ -0.15
NFKB1-201ENST00000226574 GPAMQ9HCL2 828 aa14.09□□□□□ -0.15
NFKB1-201ENST00000226574 MRPL40Q9NQ50 206 aaKnown RBP14.09□□□□□ -0.15
NFKB1-201ENST00000226574 ERBB2P04626 1255 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 SKIV2L2P42285 1042 aaKnown RBP14.08□□□□□ -0.16
NFKB1-201ENST00000226574 NEDD8Q15843 81 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 CCDC81Q6ZN84 652 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 KCNMB4Q86W47 210 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 ZDHHC14Q8IZN3 488 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 ZBTB18Q99592 522 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 MAGEB5Q9BZ81 275 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 NRDE2Q9H7Z3 1164 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 RABGEF1Q9UJ41 708 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 ZNF229Q9UJW7 825 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 MAGEB2O15479 319 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 C4BPAP04003 597 aaKnown RBP14.08□□□□□ -0.16
NFKB1-201ENST00000226574 HNRNPLP14866 589 aaKnown RBP eCLIP14.08□□□□□ -0.164e-7■■□□□ 13
NFKB1-201ENST00000226574 HSDL1Q3SXM5 330 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 ZPBP2Q6X784 338 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 LPCAT2Q7L5N7 544 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 ARHGAP22Q7Z5H3 698 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 FAM156AQ8NDB6 213 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 AGBL3Q8NEM8 1001 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 WDR60Q8WVS4 1066 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 PAIP1Q9H074 479 aaKnown RBP14.08□□□□□ -0.16
NFKB1-201ENST00000226574 XPNPEP1Q9NQW7 623 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 UNGP13051 313 aaPredicted RBP14.08□□□□□ -0.16
NFKB1-201ENST00000226574 GRIA1P42261 906 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 TAF6P49848 677 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 ATXN1P54253 815 aaKnown RBP14.08□□□□□ -0.16
NFKB1-201ENST00000226574 PDK3Q15120 406 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 TBCCQ15814 346 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 MSS51Q4VC12 460 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 ZNF470Q6ECI4 717 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 CLVS1Q8IUQ0 354 aaPredicted RBP14.08□□□□□ -0.16
NFKB1-201ENST00000226574 SIAH1Q8IUQ4 282 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 CHST13Q8NET6 341 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 HERPUD2Q9BSE4 406 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 CYLDQ9NQC7 956 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 ZNF358Q9NW07 568 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.08□□□□□ -0.16
NFKB1-201ENST00000226574 PRG3Q9Y2Y8 225 aaPredicted RBP14.08□□□□□ -0.16
NFKB1-201ENST00000226574 MYPNQ86TC9 1320 aa14.08□□□□□ -0.16
NFKB1-201ENST00000226574 KNL1Q8NG31 2342 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 YDJCA8MPS7 323 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 H3BRB1 525 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 INPP4BO15327 924 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 TIMM44O43615 452 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 MGEA5O60502 916 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 FAM58BPP0C7Q3 252 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 ME2P23368 584 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 GPR162Q16538 588 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 LRRC38Q5VT99 294 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.07□□□□□ -0.16
NFKB1-201ENST00000226574 CERKQ8TCT0 537 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 AZIN2Q96A70 460 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 NAT9Q9BTE0 207 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 CDT1Q9H211 546 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
NFKB1-201ENST00000226574 OLA1Q9NTK5 396 aaKnown RBP14.07□□□□□ -0.16
NFKB1-201ENST00000226574 GPRC5DQ9NZD1 345 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 NCKIPSDQ9NZQ3 722 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 SNED1Q8TER0 1413 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 CNTNAP2Q9UHC6 1331 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 E7ENQ6 273 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 PEX11AO75192 247 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 CHRM3P20309 590 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 ALDH1A3P47895 512 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 SLC6A3Q01959 620 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 CTBP1Q13363 440 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 TMEM132BQ14DG7 1078 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 NIPA1Q7RTP0 329 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 DHDDSQ86SQ9 333 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 RCN3Q96D15 328 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 EBNA1BP2Q99848 306 aaKnown RBP14.07□□□□□ -0.16
NFKB1-201ENST00000226574 RUBCNLQ9H714 662 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 RBM22Q9NW64 420 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■■■□□ 19
NFKB1-201ENST00000226574 ASB14A6NK59 587 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 MYO1GB0I1T2 1018 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 ZNF143P52747 638 aaPredicted RBP14.07□□□□□ -0.16
NFKB1-201ENST00000226574 BCAT1P54687 386 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 YWHAZP63104 245 aaKnown RBP14.07□□□□□ -0.16
NFKB1-201ENST00000226574 ROR2Q01974 943 aaKnown RBP14.07□□□□□ -0.16
NFKB1-201ENST00000226574 THUMPD3Q9BV44 507 aaKnown RBP14.07□□□□□ -0.16
NFKB1-201ENST00000226574 FRMD8P1Q9BZ68 369 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms