RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SLC16A1P53985 500 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 PSMD5Q16401 504 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 FAM110CQ1W6H9 321 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 HSDL1Q3SXM5 330 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 PREPLQ4J6C6 727 aaPredicted RBP18.91■□□□□ 0.62
CLIP2-201ENST00000223398 EEF1DP3Q658K8 133 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 GALNT4Q8N4A0 578 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 ZFP42Q96MM3 310 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 RARGP13631 454 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 ALDH9A1P49189 494 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 KIF2BQ8N4N8 673 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 INPP5DQ92835 1189 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 MTMR8Q96EF0 704 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 KCNK16Q96T55 309 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 ELOVL6Q9H5J4 265 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 ADH1AP07327 375 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 NPR3P17342 541 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 OCA2Q04671 838 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 DNAL1Q4LDG9 190 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 KCNT2Q6UVM3 1135 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 OTOP2Q7RTS6 562 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 ANKRD23Q86SG2 305 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 EME1Q96AY2 570 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 AHCYL2Q96HN2 611 aaKnown RBP18.91■□□□□ 0.62
CLIP2-201ENST00000223398 FAM84AQ96KN4 292 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 RBBP8Q99708 897 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 NAT9Q9BTE0 207 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 CLDN5O00501 218 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 DDX3XO00571 662 aaKnown RBP eCLIP18.9■□□□□ 0.624e-7■■■■□ 23.9
CLIP2-201ENST00000223398 EIF2B5Q13144 721 aaKnown RBP18.9■□□□□ 0.62
CLIP2-201ENST00000223398 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 MTSS1LQ765P7 747 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 MIR1-1HGQ9H1L0 117 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 OR12D3Q9UGF7 316 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 DYRK3O43781 588 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 TPST1O60507 370 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 VAPBO95292 243 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 PYGMP11217 842 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 TNNI3P19429 210 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 MMP13P45452 471 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 NUDT2P50583 147 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 ALDH6A1Q02252 535 aaKnown RBP18.9■□□□□ 0.62
CLIP2-201ENST00000223398 NXF3Q9H4D5 531 aaKnown RBP18.9■□□□□ 0.62
CLIP2-201ENST00000223398 WDR41Q9HAD4 459 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 SH3BGRLO75368 114 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 TRUB2O95900 331 aaKnown RBP18.9■□□□□ 0.62
CLIP2-201ENST00000223398 SETMARQ53H47 684 aaPredicted RBP18.9■□□□□ 0.62
CLIP2-201ENST00000223398 ARMC12Q5T9G4 340 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 ZNF438Q7Z4V0 828 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 CNPY4Q8N129 248 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 FAR2Q96K12 515 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 DNMT3LQ9UJW3 386 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 MROH1Q8NDA8 1641 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 MYO1CO00159 1063 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 KRT16P08779 473 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 CNGA3Q16281 694 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 HPGDP15428 266 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 TFE3P19532 575 aaPredicted RBP18.9■□□□□ 0.62
CLIP2-201ENST00000223398 ITGB3BPQ13352 177 aaPredicted RBP18.9■□□□□ 0.62
CLIP2-201ENST00000223398 TMED1Q13445 227 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 SEC16BQ96JE7 1060 aa18.9■□□□□ 0.62
CLIP2-201ENST00000223398 KIF1AQ12756 1690 aa18.89■□□□□ 0.62
CLIP2-201ENST00000223398 FARP2O94887 1054 aaPredicted RBP18.89■□□□□ 0.61
CLIP2-201ENST00000223398 TBL1YQ9BQ87 522 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 TM6SF2Q9BZW4 377 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 CFAP73A6NFT4 308 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 MMP3P08254 477 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 CYP2A6P11509 494 aaPredicted RBP18.89■□□□□ 0.61
CLIP2-201ENST00000223398 THOP1P52888 689 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 MGAT5Q09328 741 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 ANKS6Q68DC2 871 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 ZNF470Q6ECI4 717 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 ACTRT1Q8TDG2 376 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 WNT8BQ93098 351 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 FAM105AQ9NUU6 356 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 PADI4Q9UM07 663 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 ELK3P41970 407 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 CCNG1P51959 295 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 MED21Q13503 144 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 KCNA10Q16322 511 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 DLK2Q6UY11 383 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 FAM183BPQ6ZVS7 135 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 BUD23O43709 281 aaKnown RBP18.89■□□□□ 0.61
CLIP2-201ENST00000223398 TBL1XO60907 577 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 CDH2P19022 906 aaPredicted RBP18.89■□□□□ 0.61
CLIP2-201ENST00000223398 GTF2BQ00403 316 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 DUSP28Q4G0W2 176 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 SLC26A11Q86WA9 606 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 PARP9Q8IXQ6 854 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 OR5B17Q8NGF7 314 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 SMAD5Q99717 465 aaKnown RBP18.89■□□□□ 0.61
CLIP2-201ENST00000223398 SLC28A3Q9HAS3 691 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 RGS18Q9NS28 235 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 MAP10Q9P2G4 905 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 CDH9Q9ULB4 789 aa18.89■□□□□ 0.61
CLIP2-201ENST00000223398 PSMD12O00232 456 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-201ENST00000223398 CYP7B1O75881 506 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 FAM107AO95990 144 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 CYP51A1Q16850 503 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 PIGZQ86VD9 579 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms