RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CCR3P51677 355 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ST8SIA6P61647 398 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 OLR1P78380 273 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 CDC42EP5Q6NZY7 148 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 FAM45AQ8TCE6 357 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MYDGFQ969H8 173 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 UBE2E3Q969T4 207 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TRMOQ9BU70 441 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TMEM134Q9H6X4 195 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 CAAP1Q9H8G2 361 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SPAG4Q9NPE6 437 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ENTPD7Q9NQZ7 604 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 DNAJB4Q9UDY4 337 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SNX9Q9Y5X1 595 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SPATA31A1Q5TZJ5 1347 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 CITO14578 2027 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 NFIBO00712 420 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 STX11O75558 287 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MLYCDO95822 493 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 STAT5AP42229 794 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 CD151P48509 253 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SMIM11AP58511 58 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 COPZ1P61923 177 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 LACTB2Q53H82 288 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 HYIQ5T013 277 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MARK2Q7KZI7 788 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 TXNRD3Q86VQ6 643 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PROSER1Q86XN7 944 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TMEM86AQ8N2M4 240 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RASGEF1CQ8N431 466 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 OR56A4Q8NGH8 313 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SPATA20Q8TB22 786 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RIN2Q8WYP3 895 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 ZKSCAN4Q969J2 545 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 MRPL57Q9BQC6 102 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 ZCCHC2Q9C0B9 1178 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 CLPBQ9H078 707 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 FBXO28Q9NVF7 368 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 AP4E1Q9UPM8 1137 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RUVBL2Q9Y230 463 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 TMEM191CA6NGB0 347 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PLA2G6O60733 806 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ABCB1P08183 1280 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 PABPC1P11940 636 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 PECAM1P16284 738 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 ITGA2P17301 1181 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ATP4AP20648 1035 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MAPK8P45983 427 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 C21orf59P57076 290 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TNK2Q07912 1038 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PTP4A2Q12974 167 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PPIL2Q13356 520 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RGS21Q2M5E4 152 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 BROXQ5VW32 411 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TRIQKQ629K1 86 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TXNDC11Q6PKC3 985 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PRR23CQ6ZRP0 262 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TMEM26Q6ZUK4 368 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ALLCQ8N6M5 410 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 LEMD2Q8NC56 503 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 KBTBD8Q8NFY9 601 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RP9Q8TA86 221 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 ZFP42Q96MM3 310 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 GINS4Q9BRT9 223 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 GPR63Q9BZJ6 419 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 AAASQ9NRG9 546 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RCOR3Q9P2K3 495 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 CROTQ9UKG9 612 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SNX13Q9Y5W8 968 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MST1RQ04912 1400 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SIGLEC16A6NMB1 481 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 GPR182O15218 404 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 RAD51BO15315 384 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 MED24O75448 989 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 RXRBP28702 533 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 NPTX2P47972 431 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SERPINH1P50454 418 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 RPL14P50914 215 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 RPS6KA3P51812 740 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SLC18A1P54219 525 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 RPL10AP62906 217 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 ELAVL2Q12926 359 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 ANGPT1Q15389 498 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ZC2HC1CQ53FD0 456 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 PLEKHA7Q6IQ23 1121 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 DHDDSQ86SQ9 333 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SLC47A2Q86VL8 602 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 KSR1Q8IVT5 923 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 FAM71AQ8IYT1 594 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CCDC24Q8N4L8 307 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 NKX2-3Q8TAU0 364 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PIWIL2Q8TC59 973 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 LENG1Q96BZ8 264 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 ZNF670Q9BS34 389 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 RTKNQ9BST9 563 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CLEC4MQ9H2X3 399 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 RGS18Q9NS28 235 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SIK3Q9Y2K2 1263 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 AXIN2Q9Y2T1 843 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 WARSP23381 471 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms