RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 PRKD1Q15139 912 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 LRRC6Q86X45 466 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 PDCD7Q8N8D1 485 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 BANPQ8N9N5 519 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 OR10T2Q8NGX3 314 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 SIGLEC10Q96LC7 697 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 RMDN2Q96LZ7 410 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 UGT1A7Q9HAW7 530 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 UGT1A10Q9HAW8 530 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 UGT1A8Q9HAW9 530 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 SSU72Q9NP77 194 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 PHTF1Q9UMS5 762 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 SNX10Q9Y5X0 201 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 PTPRDP23468 1912 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 KCNK1O00180 336 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 DCLK1O15075 740 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 APOEP02649 317 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 RPLP2P05387 115 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 PYGBP11216 843 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 ERCC2P18074 760 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 PSMB4P28070 264 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 TPI1P60174 286 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 NKX3-2P78367 333 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 INTS6LQ5JSJ4 861 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 BSPRYQ5W0U4 402 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 CD300LGQ6UXG3 332 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 SLC26A11Q86WA9 606 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 METTL23Q86XA0 190 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 EBNA1BP2Q99848 306 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 PNPLA8Q9NP80 782 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 ARL2BPQ9Y2Y0 163 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 NLRC5Q86WI3 1866 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 TTC3P53804 2025 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 C9IYK1 514 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 PPP1R12AO14974 1030 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 LPXNO60711 386 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 UBOX5O94941 541 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 CSH1P0DML2 217 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 CSH2P0DML3 217 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 MGAT5Q09328 741 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 TUSC3Q13454 348 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 PAFAH1B3Q15102 231 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 PDK1Q15118 436 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 CASC4Q6P4E1 433 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 LRRTM3Q86VH5 581 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 LRRC39Q96DD0 335 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 SLC9A7Q96T83 725 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 ACBD6Q9BR61 282 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 COLEC11Q9BWP8 271 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 CSNK1G1Q9HCP0 422 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 XAB2Q9HCS7 855 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 ALG13Q9NP73 1137 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 PRKAG3Q9UGI9 489 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 FBXW11Q9UKB1 542 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 TRIM49D1C9J1S8 452 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 STK10O94804 968 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 PRKCHP24723 683 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 GLUD2P49448 558 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 WASHC5Q12768 1159 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 BMPR2Q13873 1038 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 OVOS1Q6IE37 1185 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 FAM171BQ6P995 826 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 ZNF567Q8N184 647 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 NPWQ8N729 165 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 SCAMP5Q8TAC9 235 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 GSDMBQ8TAX9 411 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 RSPH1Q8WYR4 309 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 NTAN1Q96AB6 310 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 PGBD4Q96DM1 585 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 SLC12A4Q9UP95 1085 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 BPTFQ12830 3046 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 SF3B1O75533 1304 aaKnown RBP eCLIP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 WDR27A2RRH5 827 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 TM9SF1O15321 606 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 OPHN1O60890 802 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 AOC2O75106 756 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 FDFT1P37268 417 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 SESN2P58004 480 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 SCAPQ12770 1279 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 CBLBQ13191 982 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 SEMA3BQ13214 749 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 OLIG2Q13516 323 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 SMAD1Q15797 465 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 TTC39BQ5VTQ0 682 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 ECHDC2Q86YB7 292 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 UNC5BQ8IZJ1 945 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 CNPY4Q8N129 248 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 PCSK9Q8NBP7 692 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 DEPDC1BQ8WUY9 529 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 ZNF75CPQ92670 426 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 ALKBH8Q96BT7 664 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 APOPT1Q96IL0 206 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 FAM111AQ96PZ2 611 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 TKTL2Q9H0I9 626 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 WDCPQ9H6R7 721 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 DMAP1Q9NPF5 467 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 HAUS2Q9NVX0 235 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 KLHL14Q9P2G3 628 aa8.22□□□□□ -1.09
HMGXB4-201ENST00000216106 B4GALT3O60512 393 aa8.21□□□□□ -1.09
HMGXB4-201ENST00000216106 EDF1O60869 148 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms