RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 SncaipQ99ME3 962 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Mtif3Q9CZD5 276 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Serpina1fQ9DCQ7 411 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Asah2Q9JHE3 756 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Celf2Q9Z0H4 508 aaKnown RBP9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 1700031M16RikA0A087WSH0 82 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Kpna7C0LLJ0 499 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Slc1a2P43006 572 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 NfiaQ02780 532 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Znf112Q0VAW7 879 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Rps6ka6Q7TPS0 764 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Zswim5Q80TC6 1188 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Sh3kbp1Q8R550 709 aaKnown RBP9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pcdhb1Q91Y08 818 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Chaf1bQ9D0N7 572 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Slxl1Q9D515 155 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Rab11fip1Q9D620 645 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Q9D9D9 101 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 DmgdhQ9DBT9 869 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gm8113E0CXS8 587 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Srp72F8VQC1 671 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Shoc2O88520 582 aaKnown RBP9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 TecP24604 630 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Cd19P25918 547 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pms2P54279 859 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Calb2Q08331 271 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 TraddQ3U0V2 310 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Vars2Q3U2A8 1060 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Spata20Q80YT5 790 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pgs1Q8BHF7 553 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ticam2Q8BJQ4 232 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Kct2Q8K201 259 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Sec14l2Q99J08 403 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ndufaf7Q9CWG8 436 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Dcdc2cQ9D1B8 347 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ccdc81Q9D5W4 654 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 2010005H15RikQ9D8D6 97 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pnpla6Q3TRM4 1355 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tnfrsf11bO08712 401 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Oprl1P35377 367 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ccser2Q3UHI0 833 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Hmgb4Q6P8W9 181 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Kctd2Q8CEZ0 266 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Nup85Q8R480 656 aaKnown RBP9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 TbccQ8VCN9 341 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Bco2Q99NF1 532 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Lsm7Q9CQQ8 103 aaKnown RBP9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Echdc3Q9D7J9 300 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 1700123K08RikQ9D991 295 aa9.45□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Olfr271-ps1A0A1L1SQH2 283 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tbkbp1A2A9T0 611 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Spata31d1dE9Q5W2 1247 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gm2832F7AEC7 200 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Chrna9G3X8Z7 479 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Rnf180Q3U827 592 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gga2Q6P5E6 603 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pgm5Q8BZF8 567 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Slc39a13Q8BZH0 361 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Lamtor4Q8CF66 99 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Prpf39Q8K2Z2 665 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Iqsec1Q8R0S2 961 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Rnf31Q924T7 1066 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pih1d1Q9CQJ2 290 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tmem68Q9D850 329 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Osbpl10S4R1M9 766 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 2210011C24RikA0A087WQ89 206 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tcea1P10711 301 aaKnown RBP9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Csn1s1P19228 313 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Bmp2P21274 394 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Arhgap45Q3TBD2 1116 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ceacam5Q3UKK2 947 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Plekha8Q80W71 519 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Slc44a2Q8BY89 706 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Scara3Q8C850 606 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 ItchQ8C863 864 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 P3h2Q8CG71 703 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Vps50Q8CI71 964 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Snapc1Q8K0S9 389 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Dnm1lQ8K1M6 742 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ankef1Q9D2J7 775 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Adgrb1Q3UHD1 1582 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 TriqkB2B9E1 86 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Siah3B2RWG3 268 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Vmn2r39L7N2E5 861 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pgk2P09041 417 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 PcnaP17918 261 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 PtpreP49446 699 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Sult1e1P49891 295 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Slc38a5Q3U1J0 479 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 PoliQ6R3M4 717 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Polr2eQ80UW8 210 aaKnown RBP9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Cyp2d26Q8CIM7 500 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Snx9Q91VH2 595 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Arhgef25Q9CWR0 618 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tns2Q8CGB6 1400 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Skint11A7XV14 364 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Unc5cO08747 931 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Itgb3O54890 787 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Birc5O70201 140 aa9.44□□□□□ -0.9
Scn8a-213ENSMUST00000201549 ErfP70459 551 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms