RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Ankrd40Q5SUE8 363 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 PterQ60866 349 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Shc3Q61120 474 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Znf728Q6P5C7 752 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Slc39a4Q78IQ7 660 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 TifaQ793I8 184 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Nup54Q8BTS4 510 aaKnown RBP15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Hook3Q8BUK6 718 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Parp9Q8CAS9 866 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Sirt5Q8K2C6 310 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Ccdc9Q8VC31 543 aaKnown RBP15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Emid1Q91VF5 444 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Fam187aQ9D3R5 417 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Chmp2aQ9DB34 222 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Ror1Q9Z139 937 aa15.97■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gm20431E9PY39 371 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gm3371F7CQW8 167 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Abhd12bG3UZN6 359 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Cfap73J3QPZ5 306 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 PolP11369 1281 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Mgat1P27808 447 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Ptger1P35375 405 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 IduaP48441 634 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Apobec1P51908 229 aaKnown RBP15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Sesn2P58043 480 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gabrb2P63137 512 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Rnf113a2Q14B01 337 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 EndouQ3V188 412 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 CtcfQ61164 736 aaKnown RBP15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Hspa4Q61316 841 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Rtl3Q6P1Y1 553 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Efr3bQ6ZQ18 817 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 SyncripQ7TMK9 623 aaKnown RBP15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Rhbdf2Q80WQ6 827 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Q8C5C9 218 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 HnrnplQ8R081 586 aaKnown RBP15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Olfr697Q8VFM4 317 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Oas1dQ8VI95 361 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Pcdhb17Q91VD8 799 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gps1Q99LD4 471 aaKnown RBP15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Trim12aQ99PQ1 284 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 LipfQ9CPP7 395 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Tex46Q9CPU3 165 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Lsm7Q9CQQ8 103 aaKnown RBP15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Klhl40Q9D783 621 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Sertad3Q9ERC3 197 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Strn3Q9ERG2 796 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Tcirg1Q9JHF5 834 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 TfgQ9Z1A1 397 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Orc1Q9Z1N2 840 aaKnown RBP15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Bag6Q9Z1R2 1154 aaKnown RBP15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gria3Q9Z2W9 888 aa15.96■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 MylkQ6PDN3 1941 aaKnown RBP15.96■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Fam43bA2AM80 330 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Cnbd1B1AWM0 430 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Pabpc1P29341 636 aaKnown RBP15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Atp5bP56480 529 aaKnown RBP15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Foxp2P58463 714 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Prss48Q14B25 312 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Zfp51Q3U4L8 781 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Ttf2Q5NC05 1138 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Tpgs2Q66JT5 296 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Olfr867Q7TRF3 331 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Q80Y73 168 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Trpa1Q8BLA8 1125 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Apbb3Q8R1C9 486 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Ddx56Q9D0R4 546 aaKnown RBP15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Rasgef1cQ9D300 466 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Rhobtb1Q9DAK3 695 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Elf2Q9JHC9 593 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 CtsrQ9JIA9 334 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Krt27Q9Z320 448 aa15.95■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Zfp811A0A0J9YU71 552 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Znf518bB2RRE4 1077 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Ccdc144bE9PVZ3 520 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Atp2a2O55143 1044 aaKnown RBP15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 AfpP02772 605 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 RaraP11416 462 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Slc7a2P18581 657 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 SykP48025 629 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Tespa1Q3U132 458 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Tmem237Q3V0J1 427 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Rnf215Q5SPX3 379 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Stip1Q60864 543 aaKnown RBP15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 C8bQ8BH35 589 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Atp1a1Q8VDN2 1023 aaKnown RBP15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 AslQ91YI0 464 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Mrpl4Q9DCU6 294 aaKnown RBP15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Htra2Q9JIY5 458 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Krt16Q9Z2K1 469 aa15.94■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Igkv5-39A0A0G2JDV4 115 aa15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Prrg1A2BFE8 218 aa15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Gm5415E9PXF3 478 aa15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Gm7714E9Q079 131 aa15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Kcnu1O54982 1121 aa15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Nr3c1P06537 783 aa15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Sox5P35710 763 aa15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Rps24P62849 133 aaKnown RBP15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Zscan2Q07230 614 aa15.93■□□□□ 0.14
Hmgb1-208ENSMUST00000139443 Brms1lQ3U1T3 323 aa15.93■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms