RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Glra2Q7TNC8 452 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc25a24Q8BMD8 475 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Snx30Q8CE50 437 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Pkn3Q8K045 878 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Agr3Q8R3W7 165 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Arhgef25Q9CWR0 618 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 GemP55041 295 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Fastkd1Q6DI86 829 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Prmt6Q6NZB1 378 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Mrpl57Q9CQF8 102 aaKnown RBP15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Fam227bQ9D518 532 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tmem86aQ9D8N3 241 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 NfkbiaQ9Z1E3 314 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Myh7bA2AQP0 1941 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 1700064H15RikD3Z4D4 81 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 4930444G20RikD3Z741 495 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 ItgalP24063 1163 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Casc4Q6P2L7 435 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Rhbdf1Q6PIX5 856 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 PolnQ7TQ07 864 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Armc12Q80X86 340 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Zfp446Q8C9M8 523 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Caap1Q8VDY9 356 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 MutyhQ99P21 515 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 MsraQ9D6Y7 233 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Clca1Q9D7Z6 913 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Olfr726E9Q8X3 321 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Vmn2r100E9QAZ9 850 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Dhx15O35286 795 aaKnown RBP15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Trdmt1O55055 415 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Pde8aO88502 823 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Psmb9P28076 219 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ccng1P51945 294 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Olfr725Q05A45 321 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 TraddQ3U0V2 310 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Axdnd1Q3UZ57 424 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Cep295nlQ497N6 533 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ecm1Q61508 559 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Gtf3c4Q8BMQ2 817 aaKnown RBP15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Trub1Q8C0D0 338 aaKnown RBP15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Kctd15Q8K0E1 283 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc8a2Q8K596 921 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Lrrc46Q9DAP0 323 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ptpn4Q9WU22 926 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 TfgQ9Z1A1 397 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Lactbl1S4R213 581 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Dthd1E9PZX1 795 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Zfp457L7N1X4 647 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Stra6O70491 670 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Mcpt4P21812 246 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Calb2Q08331 271 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Rundc3bQ6PDC0 408 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Dnajc9Q91WN1 259 aaKnown RBP15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Grhl1Q921D9 618 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 AF366264G3X9P9 502 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 LgmnO89017 435 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Bmp2P21274 394 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 AurkaP97477 395 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Q3UE31 404 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ddx5Q61656 614 aaKnown RBP15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Zc4h2Q68FG0 224 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Rwdd4Q9CPR1 188 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Gprc5dQ9JIL6 344 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 TriqkB2B9E1 86 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Hes2O54792 157 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Pias1O88907 651 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 AfpP02772 605 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 UmpsP13439 481 aaKnown RBP15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ddr1Q03146 911 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Lcp1Q61233 627 aaKnown RBP15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 FsbpQ8BKE5 299 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ube2q2Q8K2Z8 378 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Pkp2Q9CQ73 795 aaKnown RBP15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Trmt10bQ9D075 318 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 RalbQ9JIW9 206 aa15.93■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Kpna7C0LLJ0 499 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 FaahO08914 579 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Glb1P23780 647 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Kcna2P63141 499 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ctc1Q5SUQ9 1212 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tbc1d12Q6A039 696 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Skida1Q80YR3 822 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Nipal1Q8BMW7 416 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc39a13Q8BZH0 361 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Lrrc4cQ8C031 640 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Btbd9Q8C726 612 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Cpt1bQ924X2 772 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Katnal2Q9D3R6 539 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Gid8Q9D7M1 228 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 CdylQ9WTK2 593 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Prom1O54990 867 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Krt6aP50446 553 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Arf4P61750 180 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc15a5Q8CBB2 566 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r203Q8R273 311 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Serbp1Q9CY58 407 aaKnown RBP15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 LrgukQ9D5S7 820 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Smok3aC0HKC8 504 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Smok3bC0HKC9 504 aa15.92■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Pex5O09012 639 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms