RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Fgfr2P21803 821 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Hoxc10P31257 342 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Clec4a4Q5YIR8 236 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Stau2Q8CJ67 570 aaKnown RBP18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Wdr64Q9D565 1086 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tmem176aQ9DCS1 244 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Fads2Q9Z0R9 444 aaKnown RBP18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 MypnQ5DTJ9 1315 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gm2244L7N2A3 218 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 PrkceP16054 737 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Rps6ka3P18654 740 aaKnown RBP18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Sel1l2Q3V172 688 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 KdsrQ6GV12 332 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 CenpnQ9CZW2 337 aa18.79■□□□□ 0.6
Trim71-201ENSMUST00000111816 Col17a1Q07563 1470 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Slc16a8O35308 492 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Lins1Q3U1D0 764 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Olfr857Q7TRF7 309 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Lca5lQ8C0X0 741 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Fndc5Q8K4Z2 209 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Actrt1Q9D9J3 376 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Klra10Q9R1G6 266 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Cyp2d10P24456 504 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 NcstnP57716 708 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tmem237Q3V0J1 427 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 ChpfQ6IQX7 774 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Kcnf1Q7TSH7 493 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Strip1Q8C079 837 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Q9D8N1 392 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Cyp2j6O54750 501 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 CoilQ5SU73 570 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Q6DFW0 481 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Nsun6Q7TS68 476 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Exd2Q8VEG4 650 aaKnown RBP18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Rsph1Q8VIG3 301 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Epb41l1Q9Z2H5 879 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Nup160Q9Z0W3 1402 aaKnown RBP18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gm8113E0CXS8 587 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Dusp10Q9ESS0 483 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mtnd2P03893 345 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Eno2P17183 434 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Drg1P32233 367 aaKnown RBP18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Syt4P40749 425 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 SnrpfP62307 86 aaKnown RBP18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Klrb1Q0ZUP1 214 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Aldh1a2Q62148 518 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Reep1Q8BGH4 201 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Clic5Q8BXK9 251 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mboat7Q8CHK3 473 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Syt12Q920N7 421 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gm28036V9GXJ1 658 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Q80VP5 184 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Fig4Q91WF7 907 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Pcdha3Q91Y16 942 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mbd3l1Q9D9H3 186 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Map3k19E9Q3S4 1311 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ube2ql1A0PJN4 161 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 2610021A01RikE9Q0Q3 834 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Fam91a1Q3UVG3 837 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ddx3xQ62167 662 aaKnown RBP18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 DcakdQ8BHC4 231 aaKnown RBP18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Cdk17Q8K0D0 523 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Sorcs3Q8VI51 1219 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Dock11A2AF47 2073 aa18.78■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gm6526G3X9Q9 198 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Prim2P33610 505 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Psmc5P62196 406 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Rbl1Q64701 1063 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Agap1Q8BXK8 857 aaKnown RBP18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Q91WD4 421 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gpc1Q9QZF2 557 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 NpeppsQ11011 920 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 OmpQ64288 163 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ogfrl1Q8VE52 464 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tmem138Q9D6G5 162 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Plscr1Q9JJ00 328 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Uggt2E9Q4X2 1504 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Magea10A2AMW4 325 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mup3P04939 184 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Vsx2Q61412 361 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Trit1Q80UN9 467 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Lrrc1Q80VQ1 524 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Q8BGC1 442 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ifi205aQ8CGE8 404 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Vps4aQ8VEJ9 437 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 1700123K08RikQ9D991 295 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Trp53inp1Q9QXE4 239 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Abhd12bG3UZN6 359 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mkln1O89050 735 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 StimateQ3UF25 288 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Nlrc4Q3UP24 1024 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Lrrc75bQ7TPD7 306 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Nacc2Q9DCM7 586 aa18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mrps7Q80X85 242 aaKnown RBP18.77■□□□□ 0.6
Trim71-201ENSMUST00000111816 Srpk1O70551 648 aaKnown RBP18.77■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ppm1lQ8BHN0 360 aa18.77■□□□□ 0.59
Trim71-201ENSMUST00000111816 Adam7O35227 789 aa18.77■□□□□ 0.59
Trim71-201ENSMUST00000111816 Scd1P13516 355 aa18.77■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gna13P27601 377 aa18.77■□□□□ 0.59
Trim71-201ENSMUST00000111816 Pdlim2Q8R1G6 349 aa18.77■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms