RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Dnali1Q8BVN8 258 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Alpk2Q91ZB0 2144 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Rilpl2Q99LE1 197 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ogfod2Q9CQ04 349 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Cldnd1Q9CQX5 253 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ddit4Q9D3F7 229 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Slc39a5Q9D856 535 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Fam3aQ9D8T0 230 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 KcpQ3U492 1550 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Fibcd1A2AV25 459 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Rabgap1lA6H6A9 815 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Hsf3D0VYS2 492 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Fignl2J3QK54 644 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Zfpm1O35615 995 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 EomesO54839 707 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Shoc2O88520 582 aaKnown RBP23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 9130409I23RikQ3TS87 320 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Mrgprx2Q3UG50 352 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Tmem237Q3V0J1 427 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Cldn11Q60771 207 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Zfp512bQ6PHP4 879 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Mtnr1bQ8CIQ6 364 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Twf1Q91YR1 350 aaKnown RBP23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Dnajc14Q921R4 703 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Foxp3Q99JB6 429 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Bzw1Q9CQC6 419 aaKnown RBP23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 ArskQ9D2L1 553 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Dlgap1Q9D415 992 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ddx21Q9JIK5 851 aaKnown RBP23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 TfebQ9R210 475 aa23.43■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Col4a4Q9QZR9 1682 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 AspgA0JNU3 564 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Vmn2r115E9Q0E7 857 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gm21293E9Q4G9 266 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Spata31E9QAF0 1014 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 NoctO35710 429 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Hmga1P17095 107 aaKnown RBP23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Slc11a2P49282 568 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Eif3eP60229 445 aaKnown RBP23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Hrh2P97292 397 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ddr1Q03146 911 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 DhpsQ3TXU5 369 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Vps41Q5KU39 853 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 PrkciQ62074 595 aaKnown RBP23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 PnocQ64387 187 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Krba1Q6NXZ1 1043 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Mon1aQ6PDG8 556 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gpatch2lQ6PE65 482 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 HhatQ8BMT9 499 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Slco2b1Q8BXB6 683 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Fbxw7Q8VBV4 629 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Olfr1502Q8VG66 316 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 PlvapQ91VC4 438 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Atg13Q91YI1 516 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Mfsd5Q921Y4 450 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Rtl9Q32KG4 1339 aa23.42■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Iqcj-Schip1A0A088MLT8 559 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gm6205E9PZS2 359 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Adgrf2E9Q4J9 644 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Entpd2O55026 495 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Schip1P0DPB4 484 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Npas2P97460 816 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Lrrc47Q505F5 581 aaKnown RBP23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 PtprcapQ64697 197 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Pwwp2aQ69Z61 730 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Foxo6Q70KY4 559 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Plekhs1Q8BW88 474 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Samd3Q8C4H2 520 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gm6367Q8C6L9 287 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Camkk1Q8VBY2 505 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Nle1Q8VEJ4 485 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ppa2Q91VM9 330 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Msantd4Q91YU3 345 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Dusp21Q9D9D8 189 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Spata9Q9D9R3 252 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Abcg8Q9DBM0 673 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Tubd1Q9R1K7 455 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gm11983V9GXS8 105 aa23.41■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Lilra6A0A0B4J1F3 663 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Cyp4a12bA2A974 508 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Bfsp1A2AMT1 669 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 4930444G20RikD3Z741 495 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gm8334F7CD45 553 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ppargc1aO70343 797 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Sypl2O89104 264 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Eno1P17182 434 aaKnown RBP23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Cav1P49817 178 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Faf2Q3TDN2 445 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ccdc61Q3UJV1 511 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Arglu1Q3UL36 271 aaKnown RBP23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Skap2Q3UND0 358 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Sco1Q5SUC9 284 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Chn2Q80XD1 332 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 L3mbtl3Q8BLB7 883 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Wdr27Q8C5V5 780 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ccdc137Q8R0K4 290 aaKnown RBP23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Angel1Q8VCU0 667 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Cyp4a12aQ91WL5 508 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Hsf2bpQ9D4G2 338 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Rin2Q9D684 903 aa23.4■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms