RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Ppm1kQ8BXN7 372 aa9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Mta1Q8K4B0 715 aaKnown RBP9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Fbxw7Q8VBV4 629 aa9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Akr1c14Q91WT7 323 aa9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Necab2Q91ZP9 389 aa9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Tpd52l2Q9CYZ2 220 aaKnown RBP9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Rpl34Q9D1R9 117 aaKnown RBP9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Satl1Q9D5N8 744 aa9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Prl5a1Q9JII2 230 aa9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Pcsk1nQ9QXV0 258 aa9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Slc23a1Q9Z2J0 605 aa9.17□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Gm9573F7C950 1606 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Olfr663A0A1B0GSI9 319 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 E230025N22RikG5E8S3 482 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Gm16427J3QN52 483 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Fgf15O35622 218 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Coro1aO89053 461 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 PdgfraP26618 1089 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 IvlP48997 467 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Hsd17b2P51658 381 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Faf2Q3TDN2 445 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Ccndbp1Q3TVC7 356 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Tespa1Q3U132 458 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 E2f5Q61502 335 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Ndrg1Q62433 394 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Itga3Q62470 1053 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Ntrk3Q6VNS1 825 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Olfr1128Q7TR47 311 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Gm5622Q810Q0 167 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Q8BGC1 442 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Frmd3Q8BHD4 595 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Def6Q8C2K1 630 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Art3Q8R2G4 371 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 McmbpQ8R3C0 642 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Pcdha10Q91Y20 946 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Fam76aQ922G2 307 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 SncaipQ99ME3 962 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Znrf4Q9DAH2 327 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 PnkpQ9JLV6 522 aaKnown RBP9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Asb3Q9WV72 525 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Rhox3fA2ANE1 215 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Kcng1A2BDX4 514 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Myl4P09541 193 aaKnown RBP9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Kcnj2P35561 428 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Folr1P35846 255 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Lhx3P50481 400 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Eif4ebp2P70445 120 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Neurog1P70660 244 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Rab33aP97950 237 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Klra3Q64329 266 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Pja2Q80U04 707 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Hspbap1Q8BK58 483 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Wdr59Q8C0M0 992 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Sit1Q8C503 180 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 PvrQ8K094 408 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Fermt3Q8K1B8 665 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 OafQ8QZR4 282 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Prpsap2Q8R574 369 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Lrrc14Q8VC16 493 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Themis2Q91YX0 663 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 SardhQ99LB7 919 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Alg14Q9D081 217 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Fam114a1Q9D281 569 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 ParvbQ9ES46 365 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Tmem59Q9QY73 323 aa9.16□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Atp8b4A2ANX3 1194 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Dthd1E9PZX1 795 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Vmn2r67K7N6T2 851 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Cldn2O88552 230 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Usp2O88623 613 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Trim30aP15533 496 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Ap1m1P35585 423 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Top1Q04750 767 aaKnown RBP9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Emc10Q3TAS6 258 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Tsr1Q5SWD9 803 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Defa-rs10Q64263 91 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Syn2Q64332 586 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Ncoa7Q6DFV7 943 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Dpy19l3Q71B07 716 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Olfr26Q7TRB7 308 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Epb41l5Q8BGS1 731 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Rsad2Q8CBB9 362 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Ccdc87Q8CDL9 855 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Emid1Q91VF5 444 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Thg1lQ9CY52 298 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Olfr933Q9EQA0 308 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 AuhQ9JLZ3 314 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Pex11bQ9Z210 259 aa9.15□□□□□ -0.94
Ccdc28a-201ENSMUST00000052648 Speer4f2E9Q366 295 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Gm14496K7N5U4 849 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Fgf13P70377 245 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 SiaeP70665 541 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Frg1P97376 258 aaKnown RBP9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Ddr1Q03146 911 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 ZufspQ3T9Z9 577 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Mrgprx2Q3UG50 352 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Pik3r5Q5SW28 871 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Serpinb6Q60854 378 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Gpr19Q61121 415 aa9.15□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Six1Q62231 284 aa9.15□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms