RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Usp3Q91W36 520 aaKnown RBP15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Fam49bQ921M7 324 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Plin3Q9DBG5 437 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 IcmtQ9EQK7 283 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Tdp2Q9JJX7 370 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Ggps1Q9WTN0 300 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Tmem115Q9WUH1 350 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Iqcj-Schip1A0A088MLT8 559 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Map7d3A2AEY4 876 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Adamts6D3Z1A5 1117 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Gm10722F6VLK5 217 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Schip1P0DPB4 484 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 ChgbP16014 677 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Zfy2P20662 777 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Crabp2P22935 138 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Tac1P41539 130 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Psmb4P99026 264 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Trcg1Q58Y74 825 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Scube1Q6NZL8 1018 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Dcaf15Q6PFH3 600 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Ccdc154Q6RUT8 657 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Zdhhc15Q8BGJ0 337 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Spata21Q8BHW6 681 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Hspbap1Q8BK58 483 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Kcns3Q8BQZ8 491 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Pex6Q99LC9 981 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 GsdmcQ99NB5 468 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Fam136aQ9CR98 138 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Krt20Q9D312 431 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Pgam1Q9DBJ1 254 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Dmap1Q9JI44 468 aa15.4■□□□□ 0.06
Nup54-201ENSMUST00000038514 Olfr652B9EHE6 318 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 ShdO88834 343 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Chrna1P04756 457 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Dnmt3cP0DOY1 709 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Fgl2P12804 432 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Alox15P39654 663 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Fdft1P53798 416 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Pecam1Q08481 727 aaKnown RBP15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Q14AM7 275 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Pcnx4Q3UVY5 1174 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 E330034G19RikQ3UWX6 351 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Atp2a3Q64518 1038 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Snx15Q91WE1 337 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Zdhhc7Q91WU6 308 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Haus8Q99L00 373 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Arpc2Q9CVB6 300 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 RalbQ9JIW9 206 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Gfra4Q9JJT2 260 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Cul3Q9JLV5 768 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Dach1Q9QYB2 751 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Dnajc12Q9R022 198 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 RpgrQ9R0X5 1001 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 PignQ9R1S3 931 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 B3galt4Q9Z0F0 371 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Cops5O35864 334 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Pim1P06803 397 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Rps6ka3P18654 740 aaKnown RBP15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 EdnrbP48302 442 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Atp6v0d1P51863 351 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Ccna2P51943 422 aaKnown RBP15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Olfm3P63056 478 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 IhhP97812 411 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Fam83hQ148V8 1209 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Srbd1Q497V5 1015 aaKnown RBP15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Kcna4Q61423 654 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 RgnQ64374 299 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 ErfeQ6PGN1 340 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Olfr293Q7TS10 336 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Znf385bQ8BXJ8 482 aaKnown RBP15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Pex19Q8VCI5 299 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Arhgef3Q91X46 524 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Ndufa10Q99LC3 355 aaKnown RBP15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Med21Q9CQ39 144 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Wars2Q9CYK1 360 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Gstt4Q9D4P7 240 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Abcb9Q9JJ59 762 aa15.39■□□□□ 0.05
Nup54-201ENSMUST00000038514 Ccdc144bE9PVZ3 520 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 IkbkgO88522 412 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 AladP10518 330 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Neurog2P70447 263 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 UtyP79457 1212 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Nomo1Q6GQT9 1214 aaKnown RBP15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Rnf220Q6PDX6 566 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Chst10Q6PGK7 356 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Olfr23Q7TRX4 325 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Slc36a3Q811P0 477 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Plin5Q8BVZ1 463 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Cnot6Q8K3P5 557 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Tbc1d13Q8R3D1 400 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Ccdc86Q9JJ89 426 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Limd1Q9QXD8 668 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 PotegA5H0M4 473 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Klhl33G3UW92 533 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Vmn1r39G3UWE6 305 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 NoctO35710 429 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Akap10O88845 662 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Arf4P61750 180 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Zfp956Q3UZY6 572 aa15.38■□□□□ 0.05
Nup54-201ENSMUST00000038514 Hipk4Q3V016 616 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms