RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Sik2Q8CFH6 931 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Agr3Q8R3W7 165 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slc35c2Q8VCX2 364 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Trim16Q99PP9 556 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slc25a11Q9CR62 314 aaKnown RBP11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Noxred1Q9D3S5 366 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tle6Q9WVB3 581 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 FaahO08914 579 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dpysl4O35098 572 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Psmd7P26516 321 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nlrc4Q3UP24 1024 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Sema5bQ60519 1093 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Abhd10Q6PE15 297 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Olfr1057Q7TR75 315 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rnf168Q80XJ2 565 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Fam49aQ8BHZ0 323 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Fra10ac1Q8BP78 315 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ddx18Q8K363 660 aaKnown RBP11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gspt1Q8R050 636 aaKnown RBP11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 GOLGA7BQ9D428 167 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Clca1Q9D7Z6 913 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cab39lQ9DB16 337 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nrip2Q9JHR9 270 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Trpc2Q9R244 1172 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 IqccA2ADZ8 418 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Vmn2r19G5E8G4 854 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Soat2O88908 525 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Phkg1P07934 388 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 UmpsP13439 481 aaKnown RBP11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tubgcp3P58854 905 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mcm9Q2KHI9 1134 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ubtfl1Q3USZ2 394 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Papd5Q68ED3 633 aaKnown RBP11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Arhgap15Q811M1 481 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Stard7Q8R1R3 373 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Snx15Q91WE1 337 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 LrgukQ9D5S7 820 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Plin3Q9DBG5 437 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 CrotQ9DC50 612 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Trpc4Q9QUQ5 974 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Abca15E9PWH4 1668 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Hsd11b2P51661 386 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pdss1Q33DR2 409 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rexo4Q6PAQ4 432 aaKnown RBP11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Alkbh8Q80Y20 664 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Spata20Q80YT5 790 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Kbtbd13Q8C828 458 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Adam32Q8K410 754 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Creld1Q91XD7 420 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tmco1Q921L3 188 aaKnown RBP11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Magel2Q9QZ04 1284 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 CdylQ9WTK2 593 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ruvbl2Q9WTM5 463 aaKnown RBP11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 4930469K13RikA0A286YDB2 92 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 2010300C02RikE9Q3M9 1175 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 E230025N22RikG5E8S3 482 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Il2P04351 169 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Clcn3P51791 818 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zfp953Q3UPV7 304 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Jak2Q62120 1129 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 RubcnQ80U62 956 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Adcy4Q91WF3 1077 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dok4Q99KE3 325 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Trim8Q99PJ2 551 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nipsnap3bQ9CQE1 247 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slc29a1Q9JIM1 460 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 B4galt5Q9JMK0 388 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Trpv2Q9WTR1 756 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ecm29Q6PDI5 1840 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tnrc6cQ3UHC0 1690 aaKnown RBP11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Siglec1Q62230 1695 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Olfr391-psA0A0U1RNJ4 312 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Arhgef26D3YYY8 869 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 F830016B08RikG3UWE2 416 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gm3739L7N296 216 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 AvilO88398 819 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Msx3P70354 204 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Bop1P97452 732 aaKnown RBP11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Eif4bQ8BGD9 611 aaKnown RBP11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slc38a7Q8BWH0 463 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tbc1d17Q8BYH7 645 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Znf451Q8C0P7 1056 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Smyd2Q8R5A0 433 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Atxn10P28658 475 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Naa20P61600 178 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Q3UE31 404 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 9930111J21Rik1Q5SVP0 844 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Alas1Q8VC19 642 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Epm2aip1Q8VEH5 606 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 CrygnQ8VHL5 183 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Snrnp25Q8VIK1 123 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ccdc85cE9Q6B2 420 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 ShdO88834 343 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 PrkcdP28867 674 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ephx2P34914 554 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mmp20P57748 482 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dclk2Q6PGN3 756 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pqlc1Q80XM9 271 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Samd4aQ8CBY1 711 aaKnown RBP11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Spag16Q8K450 639 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms