RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Usp11Q99K46 921 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Mrps18aQ99N85 196 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Prl7c1Q9CRB5 251 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Znf687Q9D2D7 1237 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Iqcf1Q9D9K8 182 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Kifc1Q9QWT9 674 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ccdc13D3YV10 709 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ifit3bE9PV48 403 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Gm6205E9PZS2 359 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Vmn2r104E9Q2J5 860 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Arfip1G5E8V9 373 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Tnfrsf11bO08712 401 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 ChkaO54804 453 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 GnazO70443 355 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Il2rbP16297 539 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Scg3P47867 471 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ccr1P51675 355 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Eif3eP60229 445 aaKnown RBP13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Kcnc2Q14B80 642 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Mpzl3Q3V3F6 237 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ifnl2Q4VK74 193 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 EfsQ64355 560 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Slc39a10Q6P5F6 833 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Rimbp2Q80U40 1072 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ip6k2Q80V72 448 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Wasf2Q8BH43 497 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Fbxw21Q8BI38 468 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Heatr3Q8BQM4 679 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 LnpepQ8C129 1025 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Gm6367Q8C6L9 287 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Sbk1Q8QZX0 417 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 ClmpQ8R373 373 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Prpsap2Q8R574 369 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Pcdhga11Q91XY8 933 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Anxa13Q99JG3 317 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Dis3Q9CSH3 958 aaKnown RBP13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Tmed2Q9R0Q3 201 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Mapk13Q9Z1B7 366 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Col5a3Q9JLI2 1739 aa13.7□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Kif28pD3YXS5 1028 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ccdc74aE9Q9U8 364 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Akap1O08715 857 aaKnown RBP13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Olfm3P63056 478 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Gm29609Q3UU56 907 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Zfp658Q5PPQ4 887 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ptk6Q64434 451 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Gtf3c2Q8BL74 907 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Klhl38Q8BSF5 581 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ccdc63Q8CDV6 558 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Prpf39Q8K2Z2 665 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Micu3Q9CTY5 523 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 PygmQ9WUB3 842 aaKnown RBP13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Sgk1Q9WVC6 431 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Nr1h3Q9Z0Y9 445 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Prr14lE9Q7C4 1971 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Mup13L7N222 235 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Trdmt1O55055 415 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 AladP10518 330 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Pdha1P35486 390 aaKnown RBP13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Kcnj6P48542 425 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 SnnP61807 88 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Polr2cP97760 275 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Naf1Q3UMQ8 489 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 PkdccQ5RJI4 492 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 HarsQ61035 509 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 DstykQ6XUX1 927 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Cpa1Q7TPZ8 419 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Mical2Q8BML1 960 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Stx16Q8BVI5 326 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Snx8Q8CFD4 459 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 FdpsQ920E5 353 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ccdc22Q9JIG7 627 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Rasgrp2Q9QUG9 608 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ripk3Q9QZL0 486 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Gyg1Q9R062 333 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Syndig1A2ANU3 258 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Atp8b4A2ANX3 1194 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Cylc2B1AWN8 422 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Top6blJ3QMY9 579 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Gm3383J3QQ59 259 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Gm3164L7N2B9 238 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Gm3239L7N2D9 227 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Vmn2r39L7N2E5 861 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Fgfr1P16092 822 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Mmp13P33435 472 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Nfe2Q07279 373 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Pik3r5Q5SW28 871 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Xlr3cQ61806 226 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Ccdc117Q6PB51 277 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Serpina12Q7TMF5 413 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Nipal4Q8BZF2 406 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Fbxl13Q8CDU4 790 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Xpo7Q9EPK7 1087 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Magel2Q9QZ04 1284 aa13.69□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Tmigd3G3X8R9 209 aa13.68□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Slc1a6O35544 561 aa13.68□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Cbfa2t3O54972 620 aa13.68□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Enpp1P06802 906 aa13.68□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 AlbP07724 608 aa13.68□□□□□ -0.22
Prpf38b-201ENSMUST00000029480 Rag1P15919 1040 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms