RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Nlrp4bQ8C6J9 863 aa12.36□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Slc22a19Q8VCA0 551 aa12.36□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Tas1r3Q925D8 858 aa12.36□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Noxred1Q9D3S5 366 aa12.36□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Nme3Q9WV85 169 aa12.36□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Top3bQ9Z321 862 aaKnown RBP12.36□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Psme4Q5SSW2 1843 aa12.36□□□□□ -0.43
Rfx1-201ENSMUST00000005600 1700031M16RikA0A087WSH0 82 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 4930469K13RikA0A286YDB2 92 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Pramef17A2ASJ1 475 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Has3O08650 554 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 LynP25911 512 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Ccr1P51675 355 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 RgnQ64374 299 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Nemp1Q6ZQE4 437 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 SybuQ8BHS8 665 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Ccdc63Q8CDV6 558 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Slc25a3Q8VEM8 357 aaKnown RBP12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Rnh1Q91VI7 456 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Snx15Q91WE1 337 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Ogfod2Q9CQ04 349 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Arl10Q9QXJ4 243 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Shcbp1Q9Z179 668 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Gm6205E9PZS2 359 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Sycp3P70281 254 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Irf3P70671 419 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Snx25Q3ZT31 840 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Trcg1Q58Y74 825 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Gm6367Q8C6L9 287 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Erich5Q8K0S2 362 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 HscbQ8K3A0 234 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Mkl1Q8K4J6 964 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Zdhhc3Q8R173 299 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Cog2Q921L5 731 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 QpctQ9CYK2 362 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Pgam1Q9DBJ1 254 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Dnajb7Q9QYI8 312 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Iigp1Q9QZ85 413 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Armt1A6H630 439 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Zfp850J3QPC5 689 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Exoc7O35250 697 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 LdlrP35951 862 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Fmo3P97501 534 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Ikzf1Q03267 517 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Cfhr2Q4LDF6 332 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Aldh1a2Q62148 518 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Il17aQ62386 158 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 ItchQ8C863 864 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Tp53inp2Q8CFU8 221 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Itm2cQ91VK4 269 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Arhgef3Q91X46 524 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Mtif2Q91YJ5 727 aaKnown RBP12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Nmd3Q99L48 503 aaKnown RBP12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Nrip2Q9JHR9 270 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Dnajc12Q9R022 198 aa12.35□□□□□ -0.43
Rfx1-201ENSMUST00000005600 A0A1Y7VP24 259 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Bub1O08901 1058 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Atp6v0d1P51863 351 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Meaf6Q2VPQ9 191 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 9930111J21Rik1Q5SVP0 844 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Ddr2Q62371 854 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 NaprtQ8CC86 538 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 CherpQ8CGZ0 936 aaKnown RBP12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Msi2Q920Q6 346 aaKnown RBP12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Pcyox1Q9CQF9 505 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Fam3aQ9D8T0 230 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Tubb3Q9ERD7 450 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Rab27aQ9ERI2 221 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Dcun1d1Q9QZ73 259 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Zmynd8A2A484 1235 aaKnown RBP12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 SmgcF6VRN1 385 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Zc3h12bG3X9I7 835 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 AmacrO09174 381 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Clcn3P51791 818 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Matn1P51942 500 aaKnown RBP12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 CstaP56567 97 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Agap2Q3UHD9 1186 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 E330034G19RikQ3UWX6 351 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Exoc3l4Q6DIA2 721 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Olfr792Q7TRH9 311 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Plin3Q9DBG5 437 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 QkiQ9QYS9 341 aaKnown RBP12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Sned1Q70E20 1403 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Arhgef26D3YYY8 869 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Kifc5bE9PUA5 672 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Gimd1E9PW74 217 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 OmdO35103 423 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Cd2P08920 344 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Cdo1P60334 200 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 ThraP63058 492 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Ak8Q32M07 479 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Traf3Q60803 567 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 GapdhsQ64467 440 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Qsox1Q8BND5 748 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Pcdhb10Q91VE5 797 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 1700129C05RikQ9CQ77 218 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Ttc30bQ9CY00 664 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Dcp2Q9CYC6 422 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Stk32bQ9JJX8 414 aa12.34□□□□□ -0.43
Rfx1-201ENSMUST00000005600 Spag6Q9JLI7 507 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms