RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 GOLGA6L9A6NEM1 432 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SLC38A8A6NNN8 435 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 BTNL10A8MVZ5 291 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 K7ESF4 209 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 TAF4O00268 1085 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 KRT86O43790 486 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 FBXO21O94952 628 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 GJB6O95452 261 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 USP17L7P0C7H9 530 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 CEBPBP17676 345 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 MSNP26038 577 aaKnown RBP9.82□□□□□ -0.84
PHGDH-228ENST00000641847 ALDH1A3P47895 512 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 DAOAP59103 153 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SLC6A3Q01959 620 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 IFRD2Q12894 506 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-228ENST00000641847 ZNF268Q14587 947 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-228ENST00000641847 VEPH1Q14D04 833 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 ELF2Q15723 593 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 FAM78AQ5JUQ0 283 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SH3PXD2AQ5TCZ1 1133 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 PLEKHA7Q6IQ23 1121 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 ZNF662Q6ZS27 426 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 DENND5BQ6ZUT9 1274 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 REXO1L1PQ8IX06 675 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SCUBE3Q8IX30 993 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 RHOT2Q8IXI1 618 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 NUP93Q8N1F7 819 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SYNPOQ8N3V7 929 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SCAMP5Q8TAC9 235 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 ZNF564Q8TBZ8 553 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SMARCD2Q92925 531 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 CEP295NLQ96MC4 621 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 MCEEQ96PE7 176 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 EDEM2Q9BV94 578 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SELENOOQ9BVL4 669 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SCNM1Q9BWG6 230 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 MRPL47Q9HD33 250 aaKnown RBP9.82□□□□□ -0.84
PHGDH-228ENST00000641847 CNGB3Q9NQW8 809 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 PARVAQ9NVD7 372 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 CTTNBP2NLQ9P2B4 639 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 UVRAGQ9P2Y5 699 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 DUSP10Q9Y6W6 482 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 COL4A3Q01955 1670 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 HELZ2Q9BYK8 2649 aaKnown RBP9.82□□□□□ -0.84
PHGDH-228ENST00000641847 SDK1Q7Z5N4 2213 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 GREB1Q4ZG55 1949 aa9.82□□□□□ -0.84
PHGDH-228ENST00000641847 MTCL1Q9Y4B5 1905 aaKnown RBP9.82□□□□□ -0.84
PHGDH-228ENST00000641847 CCDC163A0A0D9SF12 145 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SHISA7A6NL88 538 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 C4orf47A7E2U8 309 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SART1O43290 800 aaKnown RBP9.81□□□□□ -0.84
PHGDH-228ENST00000641847 BUB1O43683 1085 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 ATG13O75143 517 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 DAB1O75553 588 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 GRAP2O75791 330 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 RHOBTB1O94844 696 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 RTN3O95197 1032 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-228ENST00000641847 ZBED1O96006 694 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SPINK2P20155 84 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 YWHAQP27348 245 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 NOP2P46087 812 aaKnown RBP9.81□□□□□ -0.84
PHGDH-228ENST00000641847 EPHB3P54753 998 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 NAP1L1P55209 391 aaKnown RBP9.81□□□□□ -0.84
PHGDH-228ENST00000641847 USP46P62068 366 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 MAMLD1Q13495 774 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 TCEAL1Q15170 157 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 TAF5Q15542 800 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 PLA2G2CQ5R387 149 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 DCUN1D2Q6PH85 259 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SLC26A9Q7LBE3 791 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SLC35G2Q8TBE7 412 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 IRGQQ8WZA9 623 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 NDRG1Q92597 394 aaKnown RBP9.81□□□□□ -0.84
PHGDH-228ENST00000641847 GOLGA1Q92805 767 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 GATA6Q92908 595 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 ASB16Q96NS5 453 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 CORO1BQ9BR76 489 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 FBXO44Q9H4M3 255 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SLITRK6Q9H5Y7 841 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 OSGEPQ9NPF4 335 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 COMMD8Q9NX08 183 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SALL4Q9UJQ4 1053 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 ANAPC7Q9UJX3 599 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 GUCA1BQ9UMX6 200 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 MAGED2Q9UNF1 606 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SLC8A2Q9UPR5 921 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SCML2Q9UQR0 700 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 PAXBP1Q9Y5B6 917 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 USP3Q9Y6I4 520 aa9.81□□□□□ -0.84
PHGDH-228ENST00000641847 SIGLEC16A6NMB1 481 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 YJEFN3A6XGL0 299 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 E7ENQ6 273 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 HSF2BPO75031 334 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 MTA2O94776 668 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 MOCS3O95396 460 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 ABL1P00519 1130 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 CSH1P0DML2 217 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 CSH2P0DML3 217 aa9.8□□□□□ -0.84
PHGDH-228ENST00000641847 KRT3P12035 628 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms