RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 LEFTY2O00292 366 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 MBTPS2O43462 519 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 PAPLNO95428 1278 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 FTCDO95954 541 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 KRT1P04264 644 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 FYNP06241 537 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 MIPP30301 263 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 LTBRP36941 435 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 RABGAP1LQ5R372 815 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 ERMARDQ5T6L9 678 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 TMEM150AQ86TG1 271 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 DENND1CQ8IV53 801 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 ARID3BQ8IVW6 561 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-218ENST00000641491 RBM41Q96IZ5 413 aaKnown RBP13.44□□□□□ -0.26
PHGDH-218ENST00000641491 PHF7Q9BWX1 381 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-218ENST00000641491 TRIM7Q9C029 511 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 DHX35Q9H5Z1 703 aaKnown RBP13.44□□□□□ -0.26
PHGDH-218ENST00000641491 PIGVQ9NUD9 493 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.44□□□□□ -0.26
PHGDH-218ENST00000641491 DONSONQ9NYP3 566 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 AP4E1Q9UPM8 1137 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 ALG6Q9Y672 507 aa13.44□□□□□ -0.26
PHGDH-218ENST00000641491 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-218ENST00000641491 E2F8A0AVK6 867 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 CTAGE9A4FU28 777 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 H3BRJ5 948 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 LRCH4O75427 683 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 LATS1O95835 1130 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 CASQ1P31415 396 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 CHKAP35790 457 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 CXCR3P49682 368 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 PGFP49763 221 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 ZNF135P52742 658 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-218ENST00000641491 HDAC4P56524 1084 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 RWDD2BP57060 319 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 OGDHQ02218 1023 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 SMTNL2Q2TAL5 461 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 PPP6R3Q5H9R7 873 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-218ENST00000641491 CCDC181Q5TID7 509 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 RWDD4Q6NW29 188 aaKnown RBP13.43□□□□□ -0.26
PHGDH-218ENST00000641491 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 PSTKQ8IV42 348 aaKnown RBP13.43□□□□□ -0.26
PHGDH-218ENST00000641491 REXO1L1PQ8IX06 675 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 BPIFB1Q8TDL5 484 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 DEPDC1BQ8WUY9 529 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 NTAN1Q96AB6 310 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 RPGRIP1Q96KN7 1286 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 C16orf45Q96MC5 204 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-218ENST00000641491 ASB16Q96NS5 453 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 KLF16Q9BXK1 252 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-218ENST00000641491 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 SIK2Q9H0K1 926 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 SMG9Q9H0W8 520 aaKnown RBP13.43□□□□□ -0.26
PHGDH-218ENST00000641491 KCND1Q9NSA2 647 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 BRWD1Q9NSI6 2320 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 OBP2AQ9NY56 170 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 JRKLQ9Y4A0 524 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 CAPN6Q9Y6Q1 641 aa13.43□□□□□ -0.26
PHGDH-218ENST00000641491 LRRD1A4D1F6 860 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 USP27XA6NNY8 438 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 KCNU1A8MYU2 1149 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 CREB3O43889 395 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 MOSPD3O75425 235 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 NFATC1O95644 943 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 OLFM2O95897 454 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 LAMP2P13473 410 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 WEE1P30291 646 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 CDH6P55285 790 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 TPI1P60174 286 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 NR1H3Q13133 447 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 FAM78AQ5JUQ0 283 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 LRRC38Q5VT99 294 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 SLC35F6Q8N357 371 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 C17orf53Q8N3J3 647 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-218ENST00000641491 TEKT4Q8WW24 435 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 SUSD6Q92537 303 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 ZNF592Q92610 1267 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 CENPIQ92674 756 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-218ENST00000641491 USP13Q92995 863 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-218ENST00000641491 NT5C3BQ969T7 300 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 EXOC4Q96A65 974 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 RPRD1AQ96P16 312 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-218ENST00000641491 HAPLN3Q96S86 360 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 NAPGQ99747 312 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-218ENST00000641491 CALN1Q9BXU9 219 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 GKN1Q9NS71 199 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 DUS2Q9NX74 493 aaKnown RBP13.42□□□□□ -0.26
PHGDH-218ENST00000641491 CDH22Q9UJ99 828 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 HYOU1Q9Y4L1 999 aa13.42□□□□□ -0.26
PHGDH-218ENST00000641491 MTCL1Q9Y4B5 1905 aaKnown RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 A0A0U1RQJ8 604 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 GRXCR2A6NFK2 248 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 HEPACAM2A8MVW5 462 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 EEF2KO00418 725 aaKnown RBP13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ACSL4O60488 711 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 SRGAP2O75044 1071 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 PAGE1O75459 146 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 STC2O76061 302 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ENDOD1O94919 500 aa13.41□□□□□ -0.26
PHGDH-218ENST00000641491 ADH1CP00326 375 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms