RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ATP2A3Q93084 1043 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 NKD2Q969F2 451 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 CIB1Q99828 191 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 RBM38Q9H0Z9 239 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 GMPR2Q9P2T1 348 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 GABBR1Q9UBS5 961 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 TUBGCP4Q9UGJ1 667 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 DMTF1Q9Y222 760 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 TEX264Q9Y6I9 313 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 ASTN2O75129 1339 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 PDLIM1O00151 329 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 TPP1O14773 563 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 ENTPD3O75355 529 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 MT-CO1P00395 513 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 CKMT2P17540 419 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 ACO1P21399 889 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 CDH8P55286 799 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 HSP90AA5PQ58FG0 334 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 KRT80Q6KB66 452 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 SWSAP1Q6NVH7 229 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 KYAT3Q6YP21 454 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 PATL1Q86TB9 770 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 SNX29P2Q8IUI4 249 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 RCN3Q96D15 328 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 TRIM11Q96F44 468 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 ADA2Q9NZK5 511 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 BARX2Q9UMQ3 279 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 DRG1Q9Y295 367 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 SSX2IPQ9Y2D8 614 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 KIF13BQ9NQT8 1826 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 ANKRD12Q6UB98 2062 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 A8MU76 341 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 GOLGA8TH3BQL2 631 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 SPTLC1O15269 473 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 TNFAIP8O95379 198 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 KRT3P12035 628 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 HDCP19113 662 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 KDELR1P24390 212 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 DLG2Q15700 870 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 RARS2Q5T160 578 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 AAGABQ6PD74 315 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 DLK2Q6UY11 383 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 KBTBD6Q86V97 674 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 SLC7A5P1Q8MH63 180 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 NUP93Q8N1F7 819 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 GMCL1P1Q8NEA9 526 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 FNDC8Q8TC99 324 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 PPWD1Q96BP3 646 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 NPAS2Q99743 824 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 COG4Q9H9E3 785 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 PLAC1Q9HBJ0 212 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 SSU72Q9NP77 194 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 THAP1Q9NVV9 213 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 TRNAU1APQ9NX07 287 aaKnown RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 ZDHHC7Q9NXF8 308 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 SIRPGQ9P1W8 387 aa14.16□□□□□ -0.14
SCARB2-227ENST00000640957 COL22A1Q8NFW1 1626 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-227ENST00000640957 PLIN4Q96Q06 1357 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 CEP350Q5VT06 3117 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 BTAF1O14981 1849 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 ARHGAP10A1A4S6 786 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 MMP8P22894 467 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 PSMC1P62191 440 aaKnown RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 ROR1Q01973 937 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 NIM1KQ8IY84 436 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 GABPB2Q8TAK5 448 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 DCPSQ96C86 337 aaKnown RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 TMEM79Q9BSE2 394 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 TARS2Q9BW92 718 aaKnown RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 TRPV6Q9H1D0 765 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 DHX35Q9H5Z1 703 aaKnown RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 CAB39LQ9H9S4 337 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 C20orf96Q9NUD7 363 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 RSL24D1Q9UHA3 163 aaKnown RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 SFMBT1Q9UHJ3 866 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 TMX2Q9Y320 296 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 SNX13Q9Y5W8 968 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 C7orf72A4D263 438 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 RGL2O15211 777 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 STRNO43815 780 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 CCNT2O60583 730 aaKnown RBP14.15□□□□□ -0.14
SCARB2-227ENST00000640957 AOC1P19801 751 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 GCNT1Q02742 428 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 RALGDSQ12967 914 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 PITRM1Q5JRX3 1037 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 DENND1BQ6P3S1 775 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 POTEHQ6S545 545 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 PCGF5Q86SE9 256 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 ABHD8Q96I13 439 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 KLHL32Q96NJ5 620 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 TMEM216Q9P0N5 145 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 COQ4Q9Y3A0 265 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 STK24Q9Y6E0 443 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 UBE4BO95155 1302 aa14.15□□□□□ -0.14
SCARB2-227ENST00000640957 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
SCARB2-227ENST00000640957 RNASEH2AO75792 299 aaKnown RBP14.14□□□□□ -0.15
SCARB2-227ENST00000640957 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms