RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 NKIRAS2Q9NYR9 191 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 EPS15L1Q9UBC2 864 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 TBK1Q9UHD2 729 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 TRHDEQ9UKU6 1024 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 AMFRQ9UKV5 643 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 NDRG4Q9ULP0 352 aaKnown RBP4.57□□□□□ -1.68
CCDC7-214ENST00000639453 GABRQQ9UN88 632 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 ANKRD6Q9Y2G4 727 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 LRCH1Q9Y2L9 728 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 PCDHGB3Q9Y5G1 929 aa4.57□□□□□ -1.68
CCDC7-214ENST00000639453 LRRFIP2Q9Y608 721 aaKnown RBP4.57□□□□□ -1.68
CCDC7-214ENST00000639453 TMEM110-MUSTN1A8MSY1 372 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 SMAD6O43541 496 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 MYBL2P10244 700 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 KRT10P13645 584 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 HSPA4P34932 840 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 HOXD12P35452 270 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 CHKAP35790 457 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 IARSP41252 1262 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 RPS13P62277 151 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 DSC2Q02487 901 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 CALD1Q05682 793 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 MRPL28Q13084 256 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 BOP1Q14137 746 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 GBX1Q14549 363 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 GRM3Q14832 879 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 CCDC157Q569K6 752 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 INTS11Q5TA45 600 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 DEPDC1Q5TB30 811 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 SYDE2Q5VT97 1194 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 DZIP1Q86YF9 867 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 SFTPA1Q8IWL2 248 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 IQCF2Q8IXL9 164 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 PCSK9Q8NBP7 692 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 IL17REQ8NFR9 667 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 ZNF830Q96NB3 372 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 CTAGE1Q96RT6 745 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 TRMOQ9BU70 441 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 GTPBP4Q9BZE4 634 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 MYLK2Q9H1R3 596 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 ZCCHC17Q9NP64 241 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 SMYD2Q9NRG4 433 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 UTP6Q9NYH9 597 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 CGNQ9P2M7 1197 aaKnown RBP4.56□□□□□ -1.68
CCDC7-214ENST00000639453 TMX2Q9Y320 296 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 PLEKHM1Q9Y4G2 1056 aa4.56□□□□□ -1.68
CCDC7-214ENST00000639453 PHLDB1Q86UU1 1377 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 TCRBV5S1A1TA0A578 114 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 LACTBL1A8MY62 500 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 B4DLN1 442 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 MYO1CO00159 1063 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 AP4M1O00189 453 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 B3GALNT1O75752 331 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 PF4V1P10720 104 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 CYP2C9P11712 490 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 XRCC6P12956 609 aaKnown RBP eCLIP4.55□□□□□ -1.68
CCDC7-214ENST00000639453 GLULP15104 373 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 ATP6V1B1P15313 513 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 CAPN3P20807 821 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 HOXD9P28356 352 aaPredicted RBP4.55□□□□□ -1.68
CCDC7-214ENST00000639453 GRK6P43250 576 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 KCNJ4P48050 445 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 TRPC1P48995 793 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 PAPOLAP51003 745 aaKnown RBP4.55□□□□□ -1.68
CCDC7-214ENST00000639453 UBASH3AP57075 661 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 BPIFB3P59826 476 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 BTKQ06187 659 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 NOGQ13253 232 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 BECN1Q14457 450 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 TAF12Q16514 161 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 RETSATQ6NUM9 610 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 TMEM65Q6PI78 240 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 DEF8Q6ZN54 512 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 C18orf65Q6ZTR6 163 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 RASGRP2Q7LDG7 609 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 GALNT5Q7Z7M9 940 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 CAND1Q86VP6 1230 aaKnown RBP4.55□□□□□ -1.68
CCDC7-214ENST00000639453 LSMEM1Q8N8F7 131 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 TRIML1Q8N9V2 468 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 OR8H1Q8NGG4 311 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 MPLKIPQ8TAP9 179 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 BRIX1Q8TDN6 353 aaKnown RBP4.55□□□□□ -1.68
CCDC7-214ENST00000639453 TEKT5Q96M29 485 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 MMS19Q96T76 1030 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 ZWILCHQ9H900 591 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 PLEKHA5Q9HAU0 1116 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 ARFGAP3Q9NP61 516 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 ANKEF1Q9NU02 776 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 ZNHIT6Q9NWK9 470 aaKnown RBP4.55□□□□□ -1.68
CCDC7-214ENST00000639453 IRAK4Q9NWZ3 460 aa4.55□□□□□ -1.68
CCDC7-214ENST00000639453 PA2G4Q9UQ80 394 aaKnown RBP4.55□□□□□ -1.68
CCDC7-214ENST00000639453 GPRASP1Q5JY77 1395 aa4.54□□□□□ -1.68
CCDC7-214ENST00000639453 LRRC14BA6NHZ5 514 aa4.54□□□□□ -1.68
CCDC7-214ENST00000639453 DCLK1O15075 740 aa4.54□□□□□ -1.68
CCDC7-214ENST00000639453 TLR2O60603 784 aa4.54□□□□□ -1.68
CCDC7-214ENST00000639453 PYGLP06737 847 aa4.54□□□□□ -1.68
CCDC7-214ENST00000639453 CYP19A1P11511 503 aaPredicted RBP4.54□□□□□ -1.68
CCDC7-214ENST00000639453 STMN1P16949 149 aa4.54□□□□□ -1.68
CCDC7-214ENST00000639453 ZKSCAN1P17029 563 aaPredicted RBP4.54□□□□□ -1.68
CCDC7-214ENST00000639453 ELF1P32519 619 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms