RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 STRA8Q7Z7C7 330 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 NPLOC4Q8TAT6 608 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.99□□□□□ -0.17
SCARB2-215ENST00000639145 CYP4F12Q9HCS2 524 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 WWOXQ9NZC7 414 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 SPG21Q9NZD8 308 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 ZNF212Q9UDV6 495 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 VPS9D1Q9Y2B5 631 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 ARHGAP10A1A4S6 786 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 GOLGA8TH3BQL2 631 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 B4GALT4O60513 344 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 VPS26AO75436 327 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 CYP2C18P33260 490 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 POU4F1Q01851 419 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 C1orf146Q5VVC0 180 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 TSHZ1Q6ZSZ6 1077 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 SPATA21Q7Z572 469 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 C1orf127Q8N9H9 656 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 LRRN4Q8WUT4 740 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 KREMEN1Q96MU8 473 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 ROPN1BQ9BZX4 212 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-215ENST00000639145 ROPN1Q9HAT0 212 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-215ENST00000639145 PCDH9Q9HC56 1237 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 FBXL21Q9UKT6 434 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 MYH2Q9UKX2 1941 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-215ENST00000639145 IFNA8P32881 189 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 NOMO3P69849 1222 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 LRIG3Q6UXM1 1119 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 C11orf96Q7Z7L8 435 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 TBC1D19Q8N5T2 526 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 LZTR1Q8N653 840 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 FAM161BQ96MY7 647 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 TEPSINQ96N21 525 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 SNRNP25Q9BV90 132 aaKnown RBP13.99□□□□□ -0.17
SCARB2-215ENST00000639145 SEMA4AQ9H3S1 761 aa13.99□□□□□ -0.17
SCARB2-215ENST00000639145 UBA2Q9UBT2 640 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-215ENST00000639145 ZSCAN5DPP0CG00 497 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 KDELR1P24390 212 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 MZF1P28698 734 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-215ENST00000639145 NDUFV1P49821 464 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 SP2Q02086 613 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 DNAJC3Q13217 504 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 MPP3Q13368 585 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 CUL3Q13618 768 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 ARMC6Q6NXE6 501 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 SPATA20Q8TB22 786 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 MEFVO15553 781 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-215ENST00000639145 CCDC22O60826 627 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 GABRR2P28476 465 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 ELK3P41970 407 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 SEC24CP53992 1094 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 BRD8Q9H0E9 1235 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 VIPAS39Q9H9C1 493 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 DNMT3LQ9UJW3 386 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 CASZ1Q86V15 1759 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 RPSAP08865 295 aaKnown RBP13.98□□□□□ -0.17
SCARB2-215ENST00000639145 CLCNKBP51801 687 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 CHI3L2Q15782 390 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 POM121L1PQ3SYA9 428 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 CSGALNACT1Q8TDX6 532 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 HDAC7Q8WUI4 952 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 ACTR5Q9H9F9 607 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-215ENST00000639145 PLK2Q9NYY3 685 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 WHRNQ9P202 907 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 WRAP73Q9P2S5 460 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-215ENST00000639145 RPTORQ8N122 1335 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
SCARB2-215ENST00000639145 LOC100653049A0A140TA62 436 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 RBAK-RBAKDNI3L0D1 243 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 KRT34O76011 436 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 GLP2RO95838 553 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 SLC8A1P32418 973 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 MARCKSL1P49006 195 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 AARS2Q5JTZ9 985 aaKnown RBP13.98□□□□□ -0.17
SCARB2-215ENST00000639145 CCNJLQ8IV13 435 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 ARID3BQ8IVW6 561 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-215ENST00000639145 C12orf56Q8IXR9 622 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 E2F7Q96AV8 911 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 PPCSQ9HAB8 311 aa13.98□□□□□ -0.17
SCARB2-215ENST00000639145 CNTRLQ7Z7A1 2325 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 TRAV19A0A0A6YYK7 116 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 BUD23O43709 281 aaKnown RBP13.97□□□□□ -0.17
SCARB2-215ENST00000639145 VAPBO95292 243 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 GLUD1P00367 558 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 PECAM1P16284 738 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-215ENST00000639145 STMN1P16949 149 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 ZNF143P52747 638 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-215ENST00000639145 ARHGAP1Q07960 439 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 FNDC3BQ53EP0 1204 aaKnown RBP13.97□□□□□ -0.17
SCARB2-215ENST00000639145 NPNTQ6UXI9 565 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 PHACTR4Q8IZ21 702 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCARB2-215ENST00000639145 TLE6Q9H808 572 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 RGPD1P0DJD0 1748 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 ENO1P06733 434 aaKnown RBP13.97□□□□□ -0.17
SCARB2-215ENST00000639145 CDH17Q12864 832 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
SCARB2-215ENST00000639145 TMEM259Q4ZIN3 620 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms