RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 CCHCR1Q8TD31 782 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 DQX1Q8TE96 717 aaKnown RBP15.8■□□□□ 0.12
SPIN3-219ENST00000639053 SNF8Q96H20 258 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 CEP295NLQ96MC4 621 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 SLITRK1Q96PX8 696 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 NCAPGQ9BPX3 1015 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 HERPUD2Q9BSE4 406 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 TRIM62Q9BVG3 475 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 CAPS2Q9BXY5 557 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 NUDT5Q9UKK9 219 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 PRDM4Q9UKN5 801 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 MAFFQ9ULX9 164 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 ATP8A1Q9Y2Q0 1164 aa15.8■□□□□ 0.12
SPIN3-219ENST00000639053 PLXNA3P51805 1871 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 MYO16Q9Y6X6 1858 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 LRRD1A4D1F6 860 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 H3BNC9 293 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 HMGA1P17096 107 aaKnown RBP15.79■□□□□ 0.12
SPIN3-219ENST00000639053 RDXP35241 583 aaKnown RBP15.79■□□□□ 0.12
SPIN3-219ENST00000639053 DENND2CQ68D51 928 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 MFSD7Q6UXD7 560 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 TAC4Q86UU9 113 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 FAM131BQ86XD5 332 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 ARHGAP18Q8N392 663 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 CCDC185Q8N715 623 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 CCDC89Q8N998 374 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 SNRNP25Q9BV90 132 aaKnown RBP15.79■□□□□ 0.12
SPIN3-219ENST00000639053 TMEM109Q9BVC6 243 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 FRMD8P1Q9BZ68 369 aaPredicted RBP15.79■□□□□ 0.12
SPIN3-219ENST00000639053 PIGVQ9NUD9 493 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 DDIT4Q9NX09 232 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 RRN3Q9NYV6 651 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 MSRAQ9UJ68 235 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 NEU2Q9Y3R4 380 aa15.79■□□□□ 0.12
SPIN3-219ENST00000639053 ERICH4A6NGS2 130 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 CSH1P0DML2 217 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 CSH2P0DML3 217 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 NR1D1P20393 614 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 RAB30Q15771 203 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 CA9Q16790 459 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 ZC3H12AQ5D1E8 599 aaKnown RBP15.78■□□□□ 0.12
SPIN3-219ENST00000639053 SPOCD1Q6ZMY3 1216 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 CEP128Q6ZU80 1094 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 TRMT10CQ7L0Y3 403 aaKnown RBP15.78■□□□□ 0.12
SPIN3-219ENST00000639053 KREMEN2Q8NCW0 462 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 CMASQ8NFW8 434 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-219ENST00000639053 CASP10Q92851 521 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 FOXP3Q9BZS1 431 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 TLR8Q9NR97 1041 aaKnown RBP15.78■□□□□ 0.12
SPIN3-219ENST00000639053 ASIC3Q9UHC3 531 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 FBXW11Q9UKB1 542 aa15.78■□□□□ 0.12
SPIN3-219ENST00000639053 C3orf70A6NLC5 250 aaPredicted RBP15.77■□□□□ 0.12
SPIN3-219ENST00000639053 SRRM3A6NNA2 597 aaPredicted RBP15.77■□□□□ 0.12
SPIN3-219ENST00000639053 NDC80O14777 642 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 LPXNO60711 386 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 CD48P09326 243 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 KDELR1P24390 212 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 EPHB3P54753 998 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 PLD1Q13393 1074 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 VEPH1Q14D04 833 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 ZSCAN26Q16670 478 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 BOLA3Q53S33 107 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 ODF2Q5BJF6 829 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 PPP2R2DQ66LE6 453 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 RHBDF2Q6PJF5 856 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 RNF139Q8WU17 664 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 ARNTL2Q8WYA1 636 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 PGAP3Q96FM1 320 aaPredicted RBP15.77■□□□□ 0.12
SPIN3-219ENST00000639053 HEMGNQ9BXL5 484 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 MAGEB5Q9BZ81 275 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 EPB41L4BQ9H329 900 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 WDR6Q9NNW5 1121 aaKnown RBP15.77■□□□□ 0.12
SPIN3-219ENST00000639053 TMPRSS4Q9NRS4 437 aa15.77■□□□□ 0.12
SPIN3-219ENST00000639053 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.77■□□□□ 0.12
SPIN3-219ENST00000639053 CWC15Q9P013 229 aaKnown RBP15.77■□□□□ 0.12
SPIN3-219ENST00000639053 R3HDM2Q9Y2K5 976 aaKnown RBP15.77■□□□□ 0.12
SPIN3-219ENST00000639053 hCG_1818297A0A087WSY0 165 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 GLUD1P00367 558 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 IGLV3-25P01717 112 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 ZDHHC11BP0C7U3 371 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 KRT10P13645 584 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 IVDP26440 423 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 BMP8BP34820 402 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 ARSEP51690 589 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 IFFO1Q0D2I5 559 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 SNX1Q13596 522 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 TAF12Q16514 161 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 TFDP3Q5H9I0 405 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 ERMARDQ5T6L9 678 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 KCTD16Q68DU8 428 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 DNAJB7Q7Z6W7 309 aaPredicted RBP15.77■□□□□ 0.11
SPIN3-219ENST00000639053 KCTD6Q8NC69 237 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 TEKT4Q8WW24 435 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 ATG4AQ8WYN0 398 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 SMOC2Q9H3U7 446 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.77■□□□□ 0.11
SPIN3-219ENST00000639053 CLIC5Q9NZA1 410 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.77■□□□□ 0.11
SPIN3-219ENST00000639053 SFMBT1Q9UHJ3 866 aa15.77■□□□□ 0.11
SPIN3-219ENST00000639053 DRG1Q9Y295 367 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms