RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CHRNB1P11230 501 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 BMP3P12645 472 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
CAPN3-221ENST00000638141 ECE1P42892 770 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 SF3B4Q15427 424 aaKnown RBP eCLIP12.35□□□□□ -0.437e-8■■■■□ 26.4
CAPN3-221ENST00000638141 ZYXQ15942 572 aaKnown RBP12.35□□□□□ -0.43
CAPN3-221ENST00000638141 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 FNBP1LQ5T0N5 605 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 LGSNQ5TDP6 509 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 PDPK2PQ6A1A2 396 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 PPP4R4Q6NUP7 873 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 GADL1Q6ZQY3 521 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 IGFN1Q86VF2 1251 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 ADGRF4Q8IZF3 695 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 ACDQ96AP0 544 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF347Q96SE7 839 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 MECRQ9BV79 373 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 NPLQ9BXD5 320 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-221ENST00000638141 C20orf27Q9GZN8 174 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 MARCOQ9UEW3 520 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-221ENST00000638141 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 COQ4Q9Y3A0 265 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 MEIS1O00470 390 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-221ENST00000638141 KRT75O95678 551 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 CHEK2O96017 543 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 FOSP01100 380 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-221ENST00000638141 ERBB2P04626 1255 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 LDHBP07195 334 aaKnown RBP12.35□□□□□ -0.43
CAPN3-221ENST00000638141 KITP10721 976 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 CRHR1P34998 444 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 ACADSBP45954 432 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 NUMBP49757 651 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 GPC3P51654 580 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 COG2Q14746 738 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 SIGIRRQ6IA17 410 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 TRIM72Q6ZMU5 477 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 RHPN2Q8IUC4 686 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 PDIK1LQ8N165 341 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 UBR7Q8N806 425 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 CPT1BQ92523 772 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF778Q96MU6 729 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 RMDN3Q96TC7 470 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 IFT122Q9HBG6 1241 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 RAB20Q9NX57 234 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 MTMR4Q9NYA4 1195 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 SATB2Q9UPW6 733 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 CORINQ9Y5Q5 1042 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 QSER1Q2KHR3 1735 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 IGKV6D-41A0A0C4DH26 115 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 GOLGA8CPA6NN73 597 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF839A8K0R7 811 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 SLC22A2O15244 555 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 BANF1O75531 89 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 EPHA3P29320 983 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 TMBIM6P55061 237 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 TUBA1BP68363 451 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 PPP3CAQ08209 521 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 PPP2R5DQ14738 602 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 TIGD2Q4W5G0 525 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 PLEKHA7Q6IQ23 1121 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 MAMDC4Q6UXC1 1216 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 TUBA1AQ71U36 451 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 SPERTQ8NA61 448 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 PDCD6IPQ8WUM4 868 aaKnown RBP12.34□□□□□ -0.43
CAPN3-221ENST00000638141 TRIB2Q92519 343 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 HPS1Q92902 700 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 WNK4Q96J92 1243 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 FAM118BQ9BPY3 351 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 EIF2AK1Q9BQI3 630 aaKnown RBP12.34□□□□□ -0.43
CAPN3-221ENST00000638141 VRTNQ9H8Y1 702 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 SIAEQ9HAT2 523 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-221ENST00000638141 DAPK2Q9UIK4 370 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 MYH9P35579 1960 aaKnown RBP12.34□□□□□ -0.43
CAPN3-221ENST00000638141 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-221ENST00000638141 CROCCQ5TZA2 2017 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 TCRBV9S1A1TA0A576 114 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 TRIM49D1C9J1S8 452 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 M0QX08 132 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 CLPXO76031 633 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 CD247P20963 164 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 KRT6CP48668 564 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 IDH3AP50213 366 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 NFATC3Q12968 1075 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 BNIP3Q12983 259 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 SELENBP1Q13228 472 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 ITGADQ13349 1161 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF846Q147U1 533 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF394Q53GI3 561 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 FGD3Q5JSP0 725 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 BTBD8Q5XKL5 378 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 BNC2Q6ZN30 1099 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-221ENST00000638141 LSMEM2Q8N112 164 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 SLC35B2Q8TB61 432 aa12.34□□□□□ -0.43
CAPN3-221ENST00000638141 DUS3LQ96G46 650 aaKnown RBP12.34□□□□□ -0.43
CAPN3-221ENST00000638141 SLITRK1Q96PX8 696 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms